Yoon Jung-Hoon, Kim In-Gi, Shin Yong-Kook, Park Yong-Ha
Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Korea.
Int J Syst Evol Microbiol. 2005 Jan;55(Pt 1):395-400. doi: 10.1099/ijs.0.63203-0.
Phylogenetic analysis based on 16S rRNA gene sequences revealed that Thermoactinomyces species with validly published names can be assigned to four clusters or lineages. The type strains of Thermoactinomyces sacchari and Thermoactinomyces putidus were differentiated from the type strains of Thermoactinomyces vulgaris and Thermoactinomyces intermedius by the predominant menaquinone and fatty acid profiles. The type strains of Thermoactinomyces dichotomicus and Thermoactinomyces peptonophilus formed lines of descent distinct from other Thermoactinomyces species. Thermoactinomyces dichotomicus KCTC 3667T was distinguishable from the type strains of Thermoactinomyces vulgaris and Thermoactinomyces intermedius by the contents of two fatty acids, iso-C(16 : 0) and iso-C(17 : 0). Thermoactinomyces dichotomicus could be distinguished from other Thermoactinomyces species by DNA G+C content and some phenotypic properties, particularly its property of forming a yellow colour. The type strain of Thermoactinomyces peptonophilus was distinguishable from other Thermoactinomyces species by differences in menaquinone profile, major fatty acids, DNA G+C content and some physiological properties including optimal growth temperature. On the basis of these data, the creation of three new genera, Laceyella, Thermoflavimicrobium and Seinonella, is proposed in addition to the genus Thermoactinomyces sensu stricto. The genus Laceyella gen. nov. is proposed to accommodate Thermoactinomyces sacchari and Thermoactinomyces putidus as Laceyella sacchari comb. nov. and Laceyella putida comb. nov., the genus Thermoflavimicrobium gen. nov. is proposed for Thermoactinomyces dichotomicus as Thermoflavimicrobium dichotomicum comb. nov. and the genus Seinonella gen. nov. is proposed for Thermoactinomyces peptonophilus as Seinonella peptonophila comb. nov.
基于16S rRNA基因序列的系统发育分析表明,具有有效发表名称的嗜热放线菌物种可分为四个簇或谱系。嗜热糖放线菌和恶臭嗜热放线菌的模式菌株与普通嗜热放线菌和中间嗜热放线菌的模式菌株在主要甲基萘醌和脂肪酸谱方面存在差异。双歧嗜热放线菌和嗜胨嗜热放线菌的模式菌株形成了与其他嗜热放线菌物种不同的谱系。双歧嗜热放线菌KCTC 3667T与普通嗜热放线菌和中间嗜热放线菌的模式菌株在两种脂肪酸(异-C(16 : 0)和异-C(17 : 0))的含量上有所不同。双歧嗜热放线菌可通过DNA G+C含量和一些表型特性,特别是其形成黄色的特性与其他嗜热放线菌物种区分开来。嗜胨嗜热放线菌的模式菌株在甲基萘醌谱、主要脂肪酸、DNA G+C含量以及一些生理特性(包括最适生长温度)方面与其他嗜热放线菌物种存在差异。基于这些数据,除了狭义的嗜热放线菌属外,还提议创建三个新属,即拉氏菌属、嗜热黄微菌属和西诺菌属。提议将拉氏菌属(Laceyella gen. nov.)用于容纳嗜热糖放线菌和恶臭嗜热放线菌,分别为糖拉氏菌(Laceyella sacchari comb. nov.)和恶臭拉氏菌(Laceyella putida comb. nov.);提议将嗜热黄微菌属(Thermoflavimicrobium gen. nov.)用于双歧嗜热放线菌,即双歧嗜热黄微菌(Thermoflavimicrobium dichotomicum comb. nov.);提议将西诺菌属(Seinonella gen. nov.)用于嗜胨嗜热放线菌,即嗜胨西诺菌(Seinonella peptonophila comb. nov.)。