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转运RNA作为分子弹簧在解码、容纳和肽基转移中的作用。

The role of tRNA as a molecular spring in decoding, accommodation, and peptidyl transfer.

作者信息

Frank Joachim, Sengupta Jayati, Gao Haixiao, Li Wen, Valle Mikel, Zavialov Andrey, Ehrenberg Måns

机构信息

Howard Hughes Medical Institute, Post Office Box 509, Albany, New York 12201-0509, USA.

出版信息

FEBS Lett. 2005 Feb 7;579(4):959-62. doi: 10.1016/j.febslet.2004.10.105.

DOI:10.1016/j.febslet.2004.10.105
PMID:15680982
Abstract

Translation is the process by which the genetic information contained in mRNA is used to link amino acids in a predetermined sequential order into a polypeptide chain, which then folds into a protein. Transfer RNAs (tRNAs) are the adapter molecules designed to provide the "lookup" from codons to amino acids. Cryo-EM has provided evidence that the ribosome, as a molecular machine, undergoes many structural changes during translation. Recent findings show that the tRNA structure itself undergoes large conformational changes as well, and that the decoding process must be seen as a complex dynamic interplay between tRNA and the ribosome.

摘要

翻译是一个过程,在此过程中,信使核糖核酸(mRNA)中包含的遗传信息用于将氨基酸按照预定的顺序连接成一条多肽链,然后该多肽链折叠成一种蛋白质。转运核糖核酸(tRNA)是旨在提供从密码子到氨基酸的“查找”功能的衔接分子。冷冻电子显微镜已提供证据表明,核糖体作为一种分子机器,在翻译过程中会经历许多结构变化。最近的研究结果表明,tRNA结构本身也会发生大幅度的构象变化,并且解码过程必须被视为tRNA与核糖体之间复杂的动态相互作用。

相似文献

1
The role of tRNA as a molecular spring in decoding, accommodation, and peptidyl transfer.转运RNA作为分子弹簧在解码、容纳和肽基转移中的作用。
FEBS Lett. 2005 Feb 7;579(4):959-62. doi: 10.1016/j.febslet.2004.10.105.
2
Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy.通过冷冻电子显微镜观察到氨酰tRNA掺入核糖体的过程。
Nat Struct Biol. 2003 Nov;10(11):899-906. doi: 10.1038/nsb1003. Epub 2003 Oct 19.
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Structure of ratcheted ribosomes with tRNAs in hybrid states.处于杂交状态且带有tRNA的棘轮状核糖体结构。
Proc Natl Acad Sci U S A. 2008 Nov 4;105(44):16924-7. doi: 10.1073/pnas.0809587105. Epub 2008 Oct 29.
4
[Mechanism of tRNA translocation on the ribosome].[转运RNA在核糖体上的易位机制]
Mol Biol (Mosk). 2001 Jul-Aug;35(4):655-65.
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The ribosome in focus: new structures bring new insights.聚焦核糖体:新结构带来新见解。
Trends Biochem Sci. 2007 Sep;32(9):434-41. doi: 10.1016/j.tibs.2007.08.002. Epub 2007 Aug 30.
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Movement of the decoding region of the 16 S ribosomal RNA accompanies tRNA translocation.16S核糖体RNA解码区域的移动伴随着tRNA易位。
J Mol Biol. 2000 Dec 8;304(4):507-15. doi: 10.1006/jmbi.2000.4213.
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Structure of the 30S translation initiation complex.30S翻译起始复合物的结构。
Nature. 2008 Sep 18;455(7211):416-20. doi: 10.1038/nature07192. Epub 2008 Aug 31.
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Elongation factors on the ribosome.核糖体上的延伸因子。
Curr Opin Struct Biol. 2005 Jun;15(3):349-54. doi: 10.1016/j.sbi.2005.05.004.
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Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements.70S核糖体 - tRNA复合物的晶体结构揭示了功能相互作用和重排。
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Structure of transfer RNAs: similarity and variability.tRNA 的结构:相似性和变异性。
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引用本文的文献

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Human Protein Synthesis Requires aminoacyl-tRNA Pivoting During Proofreading.人类蛋白质合成在校对过程中需要氨酰-tRNA 发生枢转。
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Tuning tRNAs for improved translation.优化转运RNA以改善翻译过程。
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Decomposing bulk signals to reveal hidden information in processive enzyme reactions: A case study in mRNA translation.将批量信号分解以揭示连续酶反应中的隐藏信息:以 mRNA 翻译为例的研究。
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Geometric alignment of aminoacyl-tRNA relative to catalytic centers of the ribosome underpins accurate mRNA decoding.氨酰基-tRNA 与核糖体催化中心的几何对准是准确解码 mRNA 的基础。
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mRNA decoding in human is kinetically and structurally distinct from bacteria.人类的 mRNA 解码在动力学和结构上与细菌不同。
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Uncovering translation roadblocks during the development of a synthetic tRNA.揭示合成 tRNA 开发过程中的翻译障碍。
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Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.反密码子茎环第 37 位的转录后修饰:MD 模拟的结构见解。
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