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通过冷冻电子显微镜观察到氨酰tRNA掺入核糖体的过程。

Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy.

作者信息

Valle Mikel, Zavialov Andrey, Li Wen, Stagg Scott M, Sengupta Jayati, Nielsen Rikke C, Nissen Poul, Harvey Stephen C, Ehrenberg Måns, Frank Joachim

机构信息

Howard Hughes Medical Institute, Health Research, Inc. at the Wadsworth Center, Empire State Plaza, Albany, New York 12201-0509, USA.

出版信息

Nat Struct Biol. 2003 Nov;10(11):899-906. doi: 10.1038/nsb1003. Epub 2003 Oct 19.

Abstract

Aminoacyl-tRNAs (aa-tRNAs) are delivered to the ribosome as part of the ternary complex of aa-tRNA, elongation factor Tu (EF-Tu) and GTP. Here, we present a cryo-electron microscopy (cryo-EM) study, at a resolution of approximately 9 A, showing that during the incorporation of the aa-tRNA into the 70S ribosome of Escherichia coli, the flexibility of aa-tRNA allows the initial codon recognition and its accommodation into the ribosomal A site. In addition, a conformational change observed in the GTPase-associated center (GAC) of the ribosomal 50S subunit may provide the mechanism by which the ribosome promotes a relative movement of the aa-tRNA with respect to EF-Tu. This relative rearrangement seems to facilitate codon recognition by the incoming aa-tRNA, and to provide the codon-anticodon recognition-dependent signal for the GTPase activity of EF-Tu. From these new findings we propose a mechanism that can explain the sequence of events during the decoding of mRNA on the ribosome.

摘要

氨酰-tRNA(aa-tRNA)作为aa-tRNA、延伸因子Tu(EF-Tu)和GTP三元复合物的一部分被递送至核糖体。在此,我们展示了一项分辨率约为9埃的冷冻电子显微镜(cryo-EM)研究,结果表明,在aa-tRNA掺入大肠杆菌70S核糖体的过程中,aa-tRNA的灵活性使得其能够进行初始密码子识别并进入核糖体A位点。此外,在核糖体50S亚基的GTP酶相关中心(GAC)观察到的构象变化可能提供了核糖体促进aa-tRNA相对于EF-Tu发生相对移动的机制。这种相对重排似乎有助于进入的aa-tRNA进行密码子识别,并为EF-Tu的GTP酶活性提供密码子-反密码子识别依赖性信号。基于这些新发现,我们提出了一种机制,该机制可以解释核糖体上mRNA解码过程中的一系列事件。

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