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通过四肽重复结构域中的偶联折叠和结合实现分子识别

Molecular recognition via coupled folding and binding in a TPR domain.

作者信息

Cliff Matthew J, Williams Mark A, Brooke-Smith John, Barford David, Ladbury John E

机构信息

Department of Biochemistry and Molecular Biology, University College London, Darwin Building, Gower Street, London WC1E 6BT, UK.

出版信息

J Mol Biol. 2005 Feb 25;346(3):717-32. doi: 10.1016/j.jmb.2004.12.017. Epub 2005 Jan 18.

Abstract

The majority of known tetratricopeptide repeat (TPR) domains consist of three copies of the helix-turn-helix TPR motif, together with a seventh C-terminal helix. TPR domains function as protein-protein recognition modules in intracellular signalling. This function is exemplified by the TPR domain of protein phosphatase 5 (PP5), which binds to the C terminus of the chaperone protein Hsp90. Here, we report NMR and CD spectroscopic studies that reveal that this domain is largely unfolded at physiological temperatures, and that interaction with an MEEVD pentapeptide derived from Hsp90 stabilises a folded structure. This complex, coupled folding-binding mechanism is characterised further by its observed enthalpy change on binding (determined by isothermal titration calorimetry), which displays a markedly non-linear relationship with temperature. A nested Gibbs-Helmholtz model is used in a novel combined analysis of the CD and ITC data to determine separately the thermodynamic contributions of the intrinsic folding and binding events to the overall coupled process. The analysis shows that, despite the expected large entropic opposition to the folding process, a nearly equal favourable folding enthalpy means the net effect of coupled folding on the observed affinity is small across a broad range of temperature. We hypothesise that a coupled folding-binding mechanism is common in this class of domains.

摘要

大多数已知的四肽重复(TPR)结构域由三个螺旋-转角-螺旋TPR基序拷贝以及第七个C末端螺旋组成。TPR结构域在细胞内信号传导中作为蛋白质-蛋白质识别模块发挥作用。蛋白磷酸酶5(PP5)的TPR结构域与伴侣蛋白Hsp90的C末端结合,就例证了这种功能。在此,我们报告了核磁共振(NMR)和圆二色(CD)光谱研究,结果表明该结构域在生理温度下基本未折叠,并且与源自Hsp90的MEEVD五肽相互作用可稳定折叠结构。这种复合物的折叠-结合偶联机制通过结合时观察到的焓变(由等温滴定量热法测定)进一步表征,该焓变与温度呈现明显的非线性关系。使用嵌套的吉布斯-亥姆霍兹模型对CD和ITC数据进行新颖的联合分析,以分别确定内在折叠和结合事件对整体偶联过程的热力学贡献。分析表明,尽管预期折叠过程存在很大的熵阻力,但几乎相等的有利折叠焓意味着在很宽的温度范围内,偶联折叠对观察到的亲和力的净影响很小。我们推测折叠-结合偶联机制在这类结构域中很常见。

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