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1
Conservation of the deadenylase activity of proteins of the Caf1 family in human.人类中Caf1家族蛋白质的去腺苷酸化酶活性的保守性。
RNA. 2005 Apr;11(4):487-94. doi: 10.1261/rna.7135305.
2
Mouse CAF1 can function as a processive deadenylase/3'-5'-exonuclease in vitro but in yeast the deadenylase function of CAF1 is not required for mRNA poly(A) removal.小鼠CAF1在体外可作为一种持续性去腺苷酸化酶/3'-5'-核酸外切酶发挥作用,但在酵母中,mRNA的聚腺苷酸化去除并不需要CAF1的去腺苷酸化酶功能。
J Biol Chem. 2004 Jun 4;279(23):23988-95. doi: 10.1074/jbc.M402803200. Epub 2004 Mar 23.
3
CAF1 plays an important role in mRNA deadenylation separate from its contact to CCR4.CAF1在mRNA去腺苷酸化过程中发挥重要作用,这与其与CCR4的接触无关。
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4
CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase.CCR4是一种3'-5'聚腺苷酸RNA和单链DNA核酸外切酶,是细胞质去腺苷酸化酶的催化成分。
EMBO J. 2002 Mar 15;21(6):1414-26. doi: 10.1093/emboj/21.6.1414.
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The yeast POP2 gene encodes a nuclease involved in mRNA deadenylation.酵母POP2基因编码一种参与mRNA去腺苷酸化的核酸酶。
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6
X-ray structure and activity of the yeast Pop2 protein: a nuclease subunit of the mRNA deadenylase complex.酵母Pop2蛋白的X射线结构与活性:mRNA去腺苷酸化酶复合体的核酸酶亚基
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Systematic mutagenesis of the leucine-rich repeat (LRR) domain of CCR4 reveals specific sites for binding to CAF1 and a separate critical role for the LRR in CCR4 deadenylase activity.对CCR4富含亮氨酸重复序列(LRR)结构域进行的系统性诱变揭示了与CAF1结合的特定位点,以及LRR在CCR4去腺苷酸化酶活性中发挥的另一个关键作用。
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The intrinsic structure of poly(A) RNA determines the specificity of Pan2 and Caf1 deadenylases.聚(A) RNA 的内在结构决定了 Pan2 和 Caf1 脱腺苷酶的特异性。
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The enzyme activities of Caf1 and Ccr4 are both required for deadenylation by the human Ccr4-Not nuclease module.人源Ccr4-Not核酸酶模块进行去腺苷酸化反应时,Caf1和Ccr4的酶活性都是必需的。
Biochem J. 2015 Jul 1;469(1):169-76. doi: 10.1042/BJ20150304. Epub 2015 May 6.

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Hypothalamic transcriptome analysis reveals male-specific differences in molecular pathways related to oxidative phosphorylation between Iberian pig genotypes.下丘脑转录组分析揭示了伊比利亚猪基因型之间与氧化磷酸化相关的分子途径的性别特异性差异。
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Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.人源 CCR4-CAF1 脱腺苷酸酶复合物的晶体结构与功能特性。
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本文引用的文献

1
A complex containing the CCR4 and CAF1 proteins is involved in mRNA deadenylation in Drosophila.一种包含CCR4和CAF1蛋白的复合物参与果蝇中的mRNA去腺苷酸化过程。
EMBO J. 2004 Jul 21;23(14):2862-71. doi: 10.1038/sj.emboj.7600273. Epub 2004 Jun 24.
2
Oligo-astheno-teratozoospermia in mice lacking Cnot7, a regulator of retinoid X receptor beta.缺乏视黄酸X受体β调节剂Cnot7的小鼠中的少弱畸精子症
Nat Genet. 2004 May;36(5):528-33. doi: 10.1038/ng1344. Epub 2004 Apr 25.
3
Mouse CAF1 can function as a processive deadenylase/3'-5'-exonuclease in vitro but in yeast the deadenylase function of CAF1 is not required for mRNA poly(A) removal.小鼠CAF1在体外可作为一种持续性去腺苷酸化酶/3'-5'-核酸外切酶发挥作用,但在酵母中,mRNA的聚腺苷酸化去除并不需要CAF1的去腺苷酸化酶功能。
J Biol Chem. 2004 Jun 4;279(23):23988-95. doi: 10.1074/jbc.M402803200. Epub 2004 Mar 23.
4
The enzymes and control of eukaryotic mRNA turnover.真核生物mRNA周转的酶及调控
Nat Struct Mol Biol. 2004 Feb;11(2):121-7. doi: 10.1038/nsmb724.
5
X-ray structure and activity of the yeast Pop2 protein: a nuclease subunit of the mRNA deadenylase complex.酵母Pop2蛋白的X射线结构与活性:mRNA去腺苷酸化酶复合体的核酸酶亚基
EMBO Rep. 2003 Dec;4(12):1150-5. doi: 10.1038/sj.embor.7400020. Epub 2003 Nov 14.
6
DcpS can act in the 5'-3' mRNA decay pathway in addition to the 3'-5' pathway.除了3'-5'途径外,DcpS还可以在5'-3'mRNA降解途径中发挥作用。
Proc Natl Acad Sci U S A. 2003 Oct 14;100(21):12081-6. doi: 10.1073/pnas.1635192100. Epub 2003 Oct 1.
7
The CCR4-NOT complex plays diverse roles in mRNA metabolism.CCR4-NOT复合物在mRNA代谢中发挥多种作用。
Prog Nucleic Acid Res Mol Biol. 2003;73:221-50. doi: 10.1016/s0079-6603(03)01007-9.
8
BTG2 antiproliferative protein interacts with the human CCR4 complex existing in vivo in three cell-cycle-regulated forms.BTG2抗增殖蛋白与在体内以三种细胞周期调节形式存在的人CCR4复合物相互作用。
J Cell Sci. 2003 Jul 15;116(Pt 14):2929-36. doi: 10.1242/jcs.00480. Epub 2003 May 27.
9
Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures.人类Dcp2:一种位于特定细胞质结构中的具有催化活性的mRNA脱帽酶。
EMBO J. 2002 Dec 16;21(24):6915-24. doi: 10.1093/emboj/cdf678.
10
Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.在无义介导的mRNA降解过程中与hUpf蛋白相关的人脱帽复合体的鉴定。
Mol Cell Biol. 2002 Dec;22(23):8114-21. doi: 10.1128/MCB.22.23.8114-8121.2002.

人类中Caf1家族蛋白质的去腺苷酸化酶活性的保守性。

Conservation of the deadenylase activity of proteins of the Caf1 family in human.

作者信息

Bianchin Claire, Mauxion Fabienne, Sentis Stéphanie, Séraphin Bertrand, Corbo Laura

机构信息

Equipe Labellisée La Ligue, Centre de Génétique Moléculaire, CNRS UPR2167 Associée à l'Université Pierre et Marie Curie, 91198 Gif sur Yvette, France.

出版信息

RNA. 2005 Apr;11(4):487-94. doi: 10.1261/rna.7135305.

DOI:10.1261/rna.7135305
PMID:15769875
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1370737/
Abstract

The yeast Pop2 protein, belonging to the eukaryotic Caf1 family, is required for mRNA deadenylation in vivo. It also catalyzes poly(A) degradation in vitro, even though this property has been questioned. Caf1 proteins are related to RNase D, a feature supported by the recently published structure of Pop2. Yeast Pop2 contains, however, a divergent active site while its human homologs harbor consensus catalytic residues. Given these differences, we tested whether its deadenylase activity is conserved in the human homologs Caf1 and Pop2. Our data demonstrate that both human factors degrade poly(A) tails indicating their involvement in mRNA metabolism.

摘要

酵母Pop2蛋白属于真核生物Caf1家族,是体内mRNA去腺苷酸化所必需的。它在体外也能催化聚腺苷酸(poly(A))的降解,尽管这一特性存在争议。Caf1蛋白与核糖核酸酶D(RNase D)相关,最近发表的Pop2结构支持了这一特征。然而,酵母Pop2含有一个不同的活性位点,而其人类同源物则具有保守的催化残基。鉴于这些差异,我们测试了其去腺苷酸酶活性在人类同源物Caf1和Pop2中是否保守。我们的数据表明,这两种人类因子都能降解聚腺苷酸尾巴,表明它们参与了mRNA代谢。