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氨酰-tRNA合成酶诱导的tRNA切割

Aminoacyl-tRNA synthetase-induced cleavage of tRNA.

作者信息

Beresten S, Jahn M, Söll D

机构信息

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511.

出版信息

Nucleic Acids Res. 1992 Apr 11;20(7):1523-30. doi: 10.1093/nar/20.7.1523.

DOI:10.1093/nar/20.7.1523
PMID:1579445
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC312233/
Abstract

Aminoacyl-tRNA synthetases interact with their cognate tRNAs in a highly specific fashion. We have examined the phenomenon that upon complex formation E. coli glutaminyl-tRNA synthetase destabilizes tRNA(Gln) causing chain scissions in the presence of Mg2+ ions. The phosphodiester bond cleavage produces 3'-phosphate and 5'-hydroxyl ends. This kind of experiment is useful for detecting conformational changes in tRNA. Our results show that the cleavage is synthetase-specific, that mutant and wild-type tRNA(Gln) species can assume a different conformation, and that modified nucleosides in tRNA enhance the structural stability of the molecule.

摘要

氨酰-tRNA合成酶以高度特异性的方式与其对应的tRNA相互作用。我们研究了这样一种现象:在形成复合物时,大肠杆菌谷氨酰胺-tRNA合成酶会使tRNA(Gln)不稳定,在Mg2+离子存在的情况下导致链断裂。磷酸二酯键的断裂产生3'-磷酸和5'-羟基末端。这种实验对于检测tRNA的构象变化很有用。我们的结果表明,这种断裂是合成酶特异性的,突变型和野生型tRNA(Gln)种类可以呈现不同的构象,并且tRNA中的修饰核苷增强了分子的结构稳定性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e0c/312233/fdb7ac6e4abc/nar00081-0085-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e0c/312233/ab5d91c87e56/nar00081-0082-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e0c/312233/fdb7ac6e4abc/nar00081-0085-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e0c/312233/ab5d91c87e56/nar00081-0082-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e0c/312233/fdb7ac6e4abc/nar00081-0085-a.jpg

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本文引用的文献

1
Tertiary structure of animal tRNATrp in solution and interaction of tRNATrp with tryptophanyl-tRNA synthetase.溶液中动物色氨酸转运RNA(tRNATrp)的三级结构以及tRNATrp与色氨酰-tRNA合成酶的相互作用。
Eur J Biochem. 1984 Jan 2;138(1):67-75. doi: 10.1111/j.1432-1033.1984.tb07882.x.
2
Effect of elongation factor Tu on the conformation of phenylalanyl-tRNAPhe.延伸因子Tu对苯丙氨酰 - tRNA苯丙氨酸构象的影响。
FEBS Lett. 1983 Apr 5;154(1):42-6. doi: 10.1016/0014-5793(83)80871-0.
3
Pb(II)-catalysed cleavage of the sugar-phosphate backbone of yeast tRNAPhe--implications for lead toxicity and self-splicing RNA.
Mosaic tile model for tRNA-enzyme recognition.
用于tRNA-酶识别的镶嵌瓷砖模型。
Nucleic Acids Res. 1993 Apr 25;21(8):1941-7. doi: 10.1093/nar/21.8.1941.
4
Recognition of bases in Escherichia coli tRNA(Gln) by glutaminyl-tRNA synthetase: a complete identity set.
EMBO J. 1992 Nov;11(11):4159-65. doi: 10.1002/j.1460-2075.1992.tb05509.x.
铅(II)催化酵母苯丙氨酸转运核糖核酸糖磷酸主链的裂解——对铅毒性和自我剪接RNA的影响
Nature. 1983;303(5917):543-6. doi: 10.1038/303543a0.
4
Interaction of tRNAPhe and tRNAVal with aminoacyl-tRNA synthetases. A chemical modification study.苯丙氨酸转运RNA和缬氨酸转运RNA与氨酰转运RNA合成酶的相互作用。一项化学修饰研究。
Eur J Biochem. 1983 May 16;132(3):537-44. doi: 10.1111/j.1432-1033.1983.tb07395.x.
5
Glutaminyl-tRNA synthetase of Escherichia coli.大肠杆菌谷氨酰胺-tRNA合成酶
Methods Enzymol. 1985;113:55-9. doi: 10.1016/s0076-6879(85)13011-9.
6
Yeast tRNAAsp tertiary structure in solution and areas of interaction of the tRNA with aspartyl-tRNA synthetase. A comparative study of the yeast phenylalanine system by phosphate alkylation experiments with ethylnitrosourea.溶液中酵母天冬氨酸tRNA的三级结构以及该tRNA与天冬氨酰-tRNA合成酶的相互作用区域。通过用乙基亚硝基脲进行磷酸烷基化实验对酵母苯丙氨酸系统的比较研究。
J Mol Biol. 1985 Aug 5;184(3):455-71. doi: 10.1016/0022-2836(85)90294-3.
7
Conformational changes and dynamics of tRNAs: evidence from hydrolysis patterns.转运RNA的构象变化与动力学:来自水解模式的证据
Cold Spring Harb Symp Quant Biol. 1987;52:113-21. doi: 10.1101/sqb.1987.052.01.016.
8
Comparison of the tertiary structure of yeast tRNA(Asp) and tRNA(Phe) in solution. Chemical modification study of the bases.溶液中酵母天冬氨酸转运核糖核酸(tRNA(Asp))和苯丙氨酸转运核糖核酸(tRNA(Phe))三级结构的比较。碱基的化学修饰研究
J Mol Biol. 1987 May 5;195(1):193-204. doi: 10.1016/0022-2836(87)90336-6.
9
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Annu Rev Biochem. 1987;56:263-87. doi: 10.1146/annurev.bi.56.070187.001403.
10
Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro.体外转录的未修饰酵母苯丙氨酸转移RNA的生化与物理特性
Proc Natl Acad Sci U S A. 1988 Feb;85(4):1033-7. doi: 10.1073/pnas.85.4.1033.