Zimmerman Julie M, Battista John R
Department of Biological Sciences, Louisiana State University and A&M College, Baton Rouge, Louisiana 70803, USA.
BMC Microbiol. 2005 Mar 31;5:17. doi: 10.1186/1471-2180-5-17.
Transmission electron microscopy images of Deinococcus radiodurans R1 suggest that the nucleoid of this species exists as a "ring-like" body, and have led to speculation that this structure contributes to the radioresistance of the species. Since extreme radioresistance is characteristic of six other species of Deinococcus, we have attempted to correlate nucleoid morphology and radioresistance by determining whether the genomic DNA of each of these species exhibit similar structures.
The nucleoid morphologies of seven recognized species of Deinococcus, the radioresistant bacterium Rubrobacter radiotolerans, and the more radiosensitive deinococcal relative Thermus aquaticus were evaluated using epifluorescence and deconvolution techniques. Although the nucleoids of Deinococcus murrayi, Deinococcus proteolyticus, Deinococcus radiophilus, and Deinococcus grandis have structures similar to D. radiodurans, the majority of nucleoids found in Deinococcus radiopugnans and Deinococcus geothermalis lack any specific organization. The nucleoid of R. radiotolerans consists of multiple highly condensed spheres of DNA scattered throughout the cell. The genomic DNA of Thermus aquaticus is uniformly distributed throughout the cell.
There is no obvious relationship between the shape of a species' nucleoid and extreme radioresistance. However, the genomes of all extremely radioresistance species examined are highly condensed relative to more radiosensitive species. Whether DNA in this tightly packed configuration contributes to the radioresistance of these bacteria remains unknown, but this common structural feature appears to limit diffusion of fragments generated post-irradiation even in cells incapable of repairing strand breaks.
耐辐射球菌R1的透射电子显微镜图像表明,该物种的类核以“环状”体形式存在,这引发了一种推测,即这种结构有助于该物种的辐射抗性。由于极端辐射抗性是其他六种耐辐射球菌属物种的特征,我们试图通过确定这些物种中每个物种的基因组DNA是否呈现相似结构,来关联类核形态与辐射抗性。
使用落射荧光和去卷积技术评估了七种公认的耐辐射球菌属物种、耐辐射红球菌以及对辐射更敏感的耐辐射球菌亲缘物种嗜热水生栖热菌的类核形态。尽管默氏耐辐射球菌、解蛋白耐辐射球菌、嗜辐射耐辐射球菌和巨大耐辐射球菌的类核结构与耐辐射球菌R1相似,但在抗辐射耐辐射球菌和地热耐辐射球菌中发现的大多数类核缺乏任何特定的组织形式。耐辐射红球菌的类核由多个高度浓缩的DNA球体分散在整个细胞中组成。嗜热水生栖热菌的基因组DNA均匀分布在整个细胞中。
一个物种类核的形状与极端辐射抗性之间没有明显关系。然而,相对于对辐射更敏感的物种,所有检测的极端抗辐射物种的基因组都高度浓缩。这种紧密堆积结构中的DNA是否有助于这些细菌的辐射抗性仍然未知,但这种共同的结构特征似乎限制了辐照后产生的片段的扩散,即使在无法修复链断裂的细胞中也是如此。