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龟速进化的线粒体DNA:龟鳖目低遗传变异性和微进化速率降低的证据

Mitochondrial DNA evolution at a turtle's pace: evidence for low genetic variability and reduced microevolutionary rate in the Testudines.

作者信息

Avise J C, Bowen B W, Lamb T, Meylan A B, Bermingham E

机构信息

Department of Genetics, University of Georgia, Athens 30602.

出版信息

Mol Biol Evol. 1992 May;9(3):457-73. doi: 10.1093/oxfordjournals.molbev.a040735.

DOI:10.1093/oxfordjournals.molbev.a040735
PMID:1584014
Abstract

Evidence is compiled suggesting a slowdown in mean microevolutionary rate for turtle mitochondrial DNA (mtDNA). Within each of six species or species complexes of Testudines, representing six genera and three taxonomic families, sequence divergence estimates derived from restriction assays are consistently lower than expectations based on either (a) the dates of particular geographic barriers with which significant mtDNA genetic clades appear associated or (b) the magnitudes of sequence divergence between mtDNA clades in nonturtle species that otherwise exhibit striking phylogeographic concordance with the genetic partitions in turtles. Magnitudes of the inferred rate slowdowns average eightfold relative to the "conventional" mtDNA clock calibration of 2%/Myr sequence divergence between higher animal lineages. Reasons for the postulated deceleration remain unknown, but two intriguing correlates are (a) the exceptionally long generation length most turtles and (b) turtles' low metabolic rate. Both factors have been suspected of influencing evolutionary rates in the DNA sequences of some other vertebrate groups. Uncertainities about the dates of cladogenetic events in these Testudines leave room for alternatives to the slowdown interpretation, but consistency in the direction of the inferred pattern, across several turtle species and evolutionary settings, suggests the need for caution in acceptance of a universal mtDNA-clock calibration for higher animals.

摘要

有证据表明龟类线粒体DNA(mtDNA)的平均微进化速率放缓。在龟鳖目六个物种或物种复合体中,分别代表六个属和三个分类科,通过限制性分析得出的序列分歧估计值始终低于基于以下两种情况的预期:(a)与显著的mtDNA遗传分支相关的特定地理屏障的形成日期;(b)在其他方面与龟类遗传划分表现出显著系统发育一致性的非龟类物种中,mtDNA分支之间的序列分歧程度。相对于高等动物谱系之间2%/百万年序列分歧的“传统”mtDNA时钟校准,推断出的速率放缓幅度平均为八倍。假定减速的原因尚不清楚,但有两个有趣的相关因素:(a)大多数龟类的世代长度异常长;(b)龟类的代谢率低。这两个因素都被怀疑会影响其他一些脊椎动物群体DNA序列的进化速率。这些龟鳖目物种中分支发生事件日期的不确定性为减速解释的替代方案留出了空间,但在几个龟类物种和进化环境中,推断模式方向的一致性表明,在接受高等动物通用的mtDNA时钟校准方面需要谨慎。

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