Peix Alvaro, Rivas Raúl, Trujillo Martha E, Vancanneyt Marc, Velázquez Encarna, Willems Anne
Departamento de Producción Vegetal, Instituto de Recursos Naturales y Agrobiología, IRNA-CSIC, Spain.
Departamento de Microbiología y Genética, Lab. 209, Edificio Departamental, Campus Miguel de Unamuno, Universidad de Salamanca, 37007 Salamanca, Spain.
Int J Syst Evol Microbiol. 2005 May;55(Pt 3):1163-1166. doi: 10.1099/ijs.0.63291-0.
Members of the species Agrobacterium ferrugineum were isolated from marine environments. The type strain of this species (= LMG 22047(T) = ATCC 25652(T)) was recently reclassified in the new genus Pseudorhodobacter, in the order 'Rhodobacterales' of the class 'Alphaproteobacteria'. Strain LMG 128 (= ATCC 25654) was also initially classified as belonging to the species Agrobacterium ferrugineum; however, the nearly complete 16S rRNA gene sequence of this strain indicated that it does not belong within the genus Agrobacterium or within the genus Pseudorhodobacter. The closest related organism, with 95.5 % 16S rRNA gene similarity, was Aquamicrobium defluvii from the family 'Phyllobacteriaceae' in the order 'Rhizobiales'. The remaining genera from this order had 16S rRNA gene sequence similarities that were lower than 95.1 % with respect to strain LMG 128. These phylogenetic distances suggested that strain LMG 128 belonged to a different genus. The major fatty acid present in strain LMG 128 was mono-unsaturated straight chain 18 : 1omega7c. The G + C content of the DNA was 53.1 mol%. Strain LMG 128 grew at 4 degrees C but not at 40 degrees C, and tolerated up to 5 % NaCl. The pH range for growth was 6-8. It produced urease and beta-galactosidase, and hydrolysed aesculin. Denitrification was negative. Growth was observed with many carbohydrates as the only carbon source. The data from this polyphasic study indicate that this strain belongs to a new genus of the family 'Phyllobacteriaceae', and therefore it is proposed that strain LMG 128(T) should be reclassified as representing a novel species within the new genus Hoeflea gen. nov., for which the name Hoeflea marina sp. nov. is proposed.
从海洋环境中分离出了铁锈色土壤杆菌属的成员。该物种的模式菌株(= LMG 22047(T) = ATCC 25652(T))最近被重新分类到新属假红杆菌属,属于“α-变形菌纲”的“红杆菌目”。菌株LMG 128(= ATCC 25654)最初也被归类为铁锈色土壤杆菌属;然而,该菌株近乎完整的16S rRNA基因序列表明它不属于土壤杆菌属或假红杆菌属。与之亲缘关系最近的生物体,16S rRNA基因相似度为95.5%,是来自“根瘤菌目”“叶杆菌科”的河流生水微菌。该目的其余属与菌株LMG 128的16S rRNA基因序列相似度低于95.1%。这些系统发育距离表明菌株LMG 128属于一个不同的属。菌株LMG 128中存在的主要脂肪酸是单不饱和直链18 : 1ω7c。DNA的G + C含量为53.1 mol%。菌株LMG 128在4℃生长但在40℃不生长,能耐受高达5%的NaCl。生长的pH范围是6 - 8。它产生脲酶和β-半乳糖苷酶,并水解七叶苷。反硝化作用为阴性。以许多碳水化合物作为唯一碳源时可观察到生长。这项多相研究的数据表明该菌株属于“叶杆菌科”的一个新属,因此建议将菌株LMG 128(T)重新分类为代表新属霍夫勒菌属(Hoeflea gen. nov.)内的一个新物种,为此提出名称霍夫勒海洋菌(Hoeflea marina sp. nov.)。