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具有假尿嘧啶化活性的古菌H/ACA小核糖核蛋白复合体的重组。

Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation.

作者信息

Charpentier Bruno, Muller Sébastien, Branlant Christiane

机构信息

Laboratoire de Maturation des ARN et Enzymologie Moléculaire, UMR 7567 UHP-CNRS, Université des Sciences et Techniques Henri Poincaré Nancy I 54506 Vandoeuvre-Lès-Nancy cedex, France.

出版信息

Nucleic Acids Res. 2005 Jun 2;33(10):3133-44. doi: 10.1093/nar/gki630. Print 2005.

Abstract

Pseudouridine (Psi) are frequently modified residues in RNA. In Eukarya, their formation is catalyzed by enzymes or by ribonucleoprotein complexes (RNPs) containing H/ACA snoRNAs. H/ACA sRNA and putative ORFs for H/ACA sRNP proteins (L7Ae, aCBF5, aNOP10 and aGAR1) were found in Archaea. Here, by using Pyrococcus abyssi recombinant proteins and an in vitro transcribed P.abyssi H/ACA sRNA, we obtained the first complete in vitro reconstitution of an active H/ACA RNP. Both L7Ae and the aCBF5 RNA:Psi synthase bind directly the sRNA; aCBF5 also interacts directly and independently with aNOP10 and aGAR1. Presence of aCBF5, aNOP10 and a U residue at the pseudouridylation site in the target RNA are required for RNA target recruitment. In agreement, we found that the aCBF5-aNOP10 pair is the minimal set of proteins needed for the formation of a particle active for pseudouridylation. However, particles more efficient in targeted pseudouridylation can be formed with the addition of proteins L7Ae and/or aGAR1. Although necessary for optimal activity, the conserved ACA motif in the sRNA was found to be not essential.

摘要

假尿苷(Ψ)是RNA中常见的修饰残基。在真核生物中,它们的形成由酶或含有H/ACA小核仁RNA(snoRNA)的核糖核蛋白复合物(RNP)催化。在古细菌中发现了H/ACA sRNA以及H/ACA sRNP蛋白(L7Ae、aCBF5、aNOP10和aGAR1)的推定开放阅读框。在这里,通过使用深渊热球菌重组蛋白和体外转录的深渊热球菌H/ACA sRNA,我们首次在体外完全重建了活性H/ACA RNP。L7Ae和aCBF5 RNA:假尿苷合酶都直接与sRNA结合;aCBF5也直接且独立地与aNOP10和aGAR1相互作用。在靶RNA的假尿苷化位点存在aCBF5、aNOP10和一个U残基是招募RNA靶标的必要条件。与此一致,我们发现aCBF5-aNOP10对是形成具有假尿苷化活性的颗粒所需的最小蛋白质组。然而,添加蛋白质L7Ae和/或aGAR1可以形成在靶向假尿苷化方面更有效的颗粒。虽然对于最佳活性是必需的,但发现sRNA中保守的ACA基序并非必不可少。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41bc/1142404/a20e84bbb7d5/gki630f1.jpg

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