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对湿度进行可控降低会在光活性黄色蛋白的光循环中引发一种快速恢复反应。

Controlled reduction of the humidity induces a shortcut recovery reaction in the photocycle of photoactive yellow protein.

作者信息

van der Horst Michael A, van Stokkum Ivo H M, Dencher Norbert A, Hellingwerf Klaas J

机构信息

Laboratory for Microbiology, Swammerdam Institute of Life Sciences, BioCentrum, University of Amsterdam, Nieuwe Achtergracht 166, 1018 WV Amsterdam, The Netherlands.

出版信息

Biochemistry. 2005 Jun 28;44(25):9160-7. doi: 10.1021/bi050237d.

Abstract

The photocycle of the blue-light photoreceptor protein Photoactive Yellow Protein (PYP) was studied at reduced relative humidity (RH). Photocycle kinetics and spectra were measured in thin films of PYP in which the relative humidity was set at values between 29 and 98% RH with saturated solutions of various salts. We show that in this range, approximately 200 water molecules per PYP molecule are released from the film. As humidity decreased, photocycle transition rates changed, until at low humidity (RH < 50%) an authentic photocycle was no longer observed and the absorption spectrum of the dark, equilibrium state of PYP started to shift to 355 nm, that is, to a form resembling that of pB(dark). At moderately reduced humidity (i.e., >50% RH), an authentic photocycle is still observed, although its characteristics differ from those in solution. As humidity decreases, the rate of ground state recovery increases, while the rate of depletion of the first red-shifted intermediate pR dramatically decreases. The latter observation contrasts all so-far known modulations of the rate of the transition of the red-shifted- to the blue-shifted intermediates of PYP, which is consistently accelerated by all other modulations of the mesoscopic context of the protein. Under these same conditions, the long-lived, blue-shifted intermediate was formed not only with slower kinetics than in solution but also to a smaller extent. Global analysis of these data indicates that in this low humidity environment the photocycle can take a different route than in solution, that is, part of pG recovers directly from pR. These experiments on wild-type PYP, in combination with observations on a variant of PYP obtained by site-directed mutagenesis (the E46Q mutant protein), further document the context dependence of the photocycle transitions of PYP and are relevant for the interpretation of results obtained in both spectroscopic and diffraction studies with crystalline PYP.

摘要

在降低的相对湿度(RH)条件下研究了蓝光光感受器蛋白光活性黄色蛋白(PYP)的光循环。在PYP薄膜中测量光循环动力学和光谱,其中通过各种盐的饱和溶液将相对湿度设定在29%至98%RH之间的值。我们表明,在此范围内,每个PYP分子约有200个水分子从薄膜中释放出来。随着湿度降低,光循环转变速率发生变化,直到在低湿度(RH<50%)时不再观察到真实的光循环,并且PYP暗态平衡态的吸收光谱开始向355nm移动,即转变为类似于pB(暗态)的形式。在适度降低的湿度(即>50%RH)下,仍可观察到真实的光循环,尽管其特征与溶液中的不同。随着湿度降低,基态恢复速率增加,而第一个红移中间体pR的消耗速率显著降低。后一观察结果与迄今为止所有已知的PYP红移中间体向蓝移中间体转变速率的调节情况形成对比,在蛋白质的介观环境的所有其他调节下,该转变速率一直加速。在相同条件下,长寿命的蓝移中间体不仅形成动力学比溶液中慢,而且形成程度也较小。对这些数据的全局分析表明,在这种低湿度环境中,光循环可能采取与溶液中不同的途径,即部分pG直接从pR恢复。这些对野生型PYP的实验,结合对通过定点诱变获得的PYP变体(E46Q突变蛋白)的观察结果,进一步证明了PYP光循环转变的环境依赖性,并且与对结晶PYP的光谱和衍射研究结果的解释相关。

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