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PPARG基因的Ala12变体是一种“非节俭等位基因”吗?

Is the Ala12 variant of the PPARG gene an "unthrifty allele"?

作者信息

Ruiz-Narváez E

机构信息

Department of Nutrition, Room 202, Harvard School of Public Health, 665 Huntington Ave, Boston, MA 02115, USA.

出版信息

J Med Genet. 2005 Jul;42(7):547-50. doi: 10.1136/jmg.2004.026765.

DOI:10.1136/jmg.2004.026765
PMID:15994875
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1736098/
Abstract

BACKGROUND

The thrifty genotype hypothesis proposes that genetic susceptibility to type 2 diabetes results from the positive selection of "thrifty" alleles in the past. A corollary of this hypothesis is that genetic variants protecting against the development of diabetes are "unthrifty" and thus subject to negative selection during human evolution.

METHODS

It was assessed whether age estimates of the diabetes protective PPARG Ala12 allele indicate effects of natural selection. Based on published data from four populations, the date of origin of the diabetes protective PPARG Ala12 variant was estimated using both allele frequency and linkage disequilibrium (LD) with the C1431T single nucleotide polymorphism in exon 6 of the PPARG gene.

RESULTS

The best LD based estimate of the age of the Ala12 allele gave an average of approximately 32,000 years with a maximum upper bound of approximately 58,000 years. Assuming a population with a growth rate of r = 0.01 per generation, the frequency based estimate of the age of the Ala12 variant gave an average of approximately 27,000 years with a maximum upper bound of approximately 42,000 years.

DISCUSSION

The similarity of both time estimates is consistent with selective equivalence of the diabetes protective PPARG Ala12 allele and the diabetes susceptible PPARG Pro12 allele.

摘要

背景

节俭基因型假说提出,2型糖尿病的遗传易感性源于过去对“节俭”等位基因的正向选择。该假说的一个推论是,预防糖尿病发生的基因变异是“不节俭的”,因此在人类进化过程中会受到负向选择。

方法

评估了糖尿病保护性PPARG Ala12等位基因的年龄估计是否表明自然选择的作用。基于来自四个人群的已发表数据,使用等位基因频率以及与PPARG基因第6外显子中C1431T单核苷酸多态性的连锁不平衡(LD)来估计糖尿病保护性PPARG Ala12变异的起源日期。

结果

基于LD对Ala12等位基因年龄的最佳估计平均约为32000年,最大上限约为58000年。假设一个种群的世代增长率r = 0.01,基于频率对Ala12变异年龄的估计平均约为27000年,最大上限约为42000年。

讨论

两种时间估计的相似性与糖尿病保护性PPARG Ala12等位基因和糖尿病易感性PPARG Pro12等位基因的选择等效性一致。

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Differential effects of the C1431T and Pro12Ala PPARgamma gene variants on plasma lipids and diabetes risk in an Asian population.C1431T和Pro12Ala过氧化物酶体增殖物激活受体γ基因变体对亚洲人群血脂及糖尿病风险的差异影响。
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Association of common polymorphisms in inflammatory genes interleukin (IL)6, IL8, tumor necrosis factor alpha, NFKB1, and peroxisome proliferator-activated receptor gamma with colorectal cancer.炎症基因白细胞介素(IL)6、IL8、肿瘤坏死因子α、NFKB1和过氧化物酶体增殖物激活受体γ中的常见多态性与结直肠癌的关联。
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Alanine for proline substitution in the peroxisome proliferator-activated receptor gamma-2 (PPARG2) gene and the risk of incident myocardial infarction.过氧化物酶体增殖物激活受体γ-2(PPARG2)基因中丙氨酸替代脯氨酸与新发心肌梗死风险
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Haplotype analysis of the PPARgamma Pro12Ala and C1431T variants reveals opposing associations with body weight.过氧化物酶体增殖物激活受体γ(PPARγ)基因Pro12Ala和C1431T变体的单倍型分析显示与体重存在相反的关联。
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Testing for population subdivision and association in four case-control studies.四项病例对照研究中的群体细分与关联性检测。
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Insulin resistance is attenuated in women with polycystic ovary syndrome with the Pro(12)Ala polymorphism in the PPARgamma gene.在患有多囊卵巢综合征且PPARγ基因存在Pro(12)Ala多态性的女性中,胰岛素抵抗有所减轻。
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Estimating allele age.估计等位基因年龄。
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