Suppr超能文献

细胞色素c2与球形红杆菌光合反应中心之间的相互作用:阳离子-π相互作用

Interactions between cytochrome c2 and the photosynthetic reaction center from Rhodobacter sphaeroides: the cation-pi interaction.

作者信息

Paddock M L, Weber K H, Chang C, Okamura M Y

机构信息

Department of Physics, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093, USA.

出版信息

Biochemistry. 2005 Jul 19;44(28):9619-25. doi: 10.1021/bi050651d.

Abstract

The cation-pi interaction between positively charged and aromatic groups is a common feature of many proteins and protein complexes. The structure of the complex between cytochrome c(2) (cyt c(2)) and the photosynthetic reaction center (RC) from Rhodobacter sphaeroides exhibits a cation-pi complex formed between Arg-C32 on cyt c(2) and Tyr-M295 on the RC [Axelrod, H. L., et al. (2002) J. Mol. Biol. 319, 501-515]. The importance of the cation-pi interaction for binding and electron transfer was studied by mutating Tyr-M295 and Arg-C32. The first- and second-order rates for electron transfer were not affected by mutating Tyr-M295 to Ala, indicating that the cation-pi complex does not greatly affect the association process or structure of the state active in electron transfer. The dissociation constant K(D) showed a greater increase when Try-M295 was replaced with nonaromatic Ala (3-fold) as opposed to aromatic Phe (1.2-fold), which is characteristic of a cation-pi interaction. Replacement of Arg-C32 with Ala increased K(D) (80-fold) largely due to removal of electrostatic interactions with negatively charged residues on the RC. Replacement with Lys increased K(D) (6-fold), indicating that Lys does not form a cation-pi complex. This specificity for Arg may be due to a solvation effect. Double mutant analysis indicates an interaction energy between Tyr-M295 and Arg-C32 of approximately -24 meV (-0.6 kcal/mol). This energy is surprisingly small considering the widespread occurrence of cation-pi complexes and may be due to the tradeoff between the favorable cation-pi binding energy and the unfavorable desolvation energy needed to bury Arg-C32 in the short-range contact region between the two proteins.

摘要

带正电荷基团与芳香族基团之间的阳离子-π相互作用是许多蛋白质及蛋白质复合物的共同特征。细胞色素c2(cyt c2)与球形红杆菌光合反应中心(RC)之间的复合物结构显示,在cyt c2上的精氨酸-C32与RC上的酪氨酸-M295之间形成了阳离子-π复合物[阿克塞尔罗德,H.L.等人(2002年)《分子生物学杂志》319卷,501 - 515页]。通过对酪氨酸-M295和精氨酸-C32进行突变,研究了阳离子-π相互作用对结合及电子转移的重要性。将酪氨酸-M295突变为丙氨酸,电子转移的一级和二级速率未受影响,这表明阳离子-π复合物对电子转移活性状态的缔合过程或结构影响不大。解离常数K(D)在酪氨酸-M295被非芳香族丙氨酸取代时(增加3倍)比被芳香族苯丙氨酸取代时(增加1.2倍)增加得更多,这是阳离子-π相互作用的特征。用丙氨酸取代精氨酸-C32使K(D)增加(80倍),主要是因为消除了与RC上带负电荷残基的静电相互作用。用赖氨酸取代使K(D)增加(6倍),表明赖氨酸不形成阳离子-π复合物。对精氨酸的这种特异性可能是由于溶剂化效应。双突变分析表明酪氨酸-M295与精氨酸-C32之间的相互作用能约为-24毫电子伏特(-0.6千卡/摩尔)。考虑到阳离子-π复合物广泛存在,这个能量小得出奇,这可能是由于在阳离子-π结合能与将精氨酸-C32埋入两种蛋白质之间短程接触区域所需的不利去溶剂化能之间进行了权衡。

相似文献

引用本文的文献

本文引用的文献

7
Cation-pi interactions in ligand recognition and catalysis.配体识别与催化中的阳离子-π相互作用。
Trends Pharmacol Sci. 2002 Jun;23(6):281-7. doi: 10.1016/s0165-6147(02)02027-8.
10
The Cationminus signpi Interaction.阳离子减号π相互作用。
Chem Rev. 1997 Aug 5;97(5):1303-1324. doi: 10.1021/cr9603744.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验