Xu Guoqiang, Narayan Mahesh, Scheraga Harold A
Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853-1301, USA.
Biochemistry. 2005 Jul 19;44(28):9817-23. doi: 10.1021/bi0506932.
Bovine pancreatic ribonuclease B (RNase B) differs from RNase A by the presence of an oligosaccharide moiety covalently attached to Asn 34. Oxidative folding studies of RNase B were carried out at different temperatures using DTT(ox) as the oxidizing agent, and the results were compared with those for RNase A. The oxidative folding rates of RNase B are between 1.7 and 1.3 times faster than those of RNase A at the temperatures that were investigated. The folding pathways of RNase B were determined to be similar to those of RNase A in that two structured intermediates, each lacking one native disulfide bond, were found to populate the regeneration pathways at 25 degrees C and pH 8.3. The thermodynamic stabilities of these two glycosylated intermediates, and their rates of formation from their unstructured precursors in the rate-determining step, were found to be higher than those of their unglycosylated counterparts from RNase A. Thus, the underlying cause for the faster rate of oxidative regeneration of native RNase B appears to be both thermodynamic and kinetic due to the higher stability, and faster rate of formation, of the intermediates of RNase B compared to those of RNase A.
牛胰核糖核酸酶B(RNase B)与核糖核酸酶A(RNase A)的不同之处在于,它在天冬酰胺34处存在一个共价连接的寡糖部分。以二硫苏糖醇(氧化型)(DTT(ox))作为氧化剂,在不同温度下对RNase B进行了氧化折叠研究,并将结果与RNase A的结果进行了比较。在所研究的温度下,RNase B的氧化折叠速率比RNase A快1.7至1.3倍。RNase B的折叠途径被确定与RNase A相似,即在25℃和pH 8.3条件下,发现两种结构化中间体(每种都缺少一个天然二硫键)出现在再生途径中。发现这两种糖基化中间体的热力学稳定性,以及它们在速率决定步骤中从非结构化前体形成的速率,均高于RNase A中相应的非糖基化中间体。因此,天然RNase B氧化再生速率更快的根本原因似乎是热力学和动力学方面的,这是由于与RNase A相比,RNase B中间体具有更高的稳定性和更快的形成速率。