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The polypeptide chain fold in tyrosine phenol-lyase, a pyridoxal-5'-phosphate-dependent enzyme.

作者信息

Antson A A, Strokopytov B V, Murshudov G N, Isupov M N, Harutyunyan E H, Demidkina T V, Vassylyev D G, Dauter Z, Terry H, Wilson K S

机构信息

European Molecular Biology Laboratory, DESY, Hamburg, Germany.

出版信息

FEBS Lett. 1992 May 18;302(3):256-60. doi: 10.1016/0014-5793(92)80454-o.

DOI:10.1016/0014-5793(92)80454-o
PMID:1601133
Abstract

The tyrosine phenol lyase (EC 4.1.99.2) from Citrobacter intermedius has been crystallised in the apo form by vapour diffusion. The space group is P2(1)2(1)2. The unit cell has dimensions a = 76.0 A, b = 138.3 A, c = 93.5 A and it contains two subunits of the tetrameric molecule in the asymmetric unit. Diffraction data for the native enzyme and two heavy atom derivatives have been collected with synchrotron radiation and an image plate scanner. The structure has been solved at 2.7 A resolution by isomorphous replacement with subsequent modification of the phases by averaging the density around the non-crystallographic symmetry axis. The electron density maps clearly show the relative orientation of the subunits and most of the trace of the polypeptide chain. Each subunit consists of two domains. The topology of the large domain appears to be similar to that of the aminotransferases.

摘要

相似文献

1
The polypeptide chain fold in tyrosine phenol-lyase, a pyridoxal-5'-phosphate-dependent enzyme.
FEBS Lett. 1992 May 18;302(3):256-60. doi: 10.1016/0014-5793(92)80454-o.
2
Crystallization and crystal data on tyrosine phenol-lyase.酪氨酸酚裂解酶的结晶及晶体数据。
FEBS Lett. 1988 May 23;232(2):381-2. doi: 10.1016/0014-5793(88)80774-9.
3
Three-dimensional structure of tyrosine phenol-lyase.酪氨酸酚裂解酶的三维结构
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4
Structures of apo- and holo-tyrosine phenol-lyase reveal a catalytically critical closed conformation and suggest a mechanism for activation by K+ ions.脱辅基和全酶形式的酪氨酸酚裂解酶结构揭示了一种催化关键的闭合构象,并提出了钾离子激活的机制。
Biochemistry. 2006 Jun 20;45(24):7544-52. doi: 10.1021/bi0601858.
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Purification and crystals of tyrosine phenol-lyase from Erwinia herbicola.
Biochem Mol Biol Int. 1996 Feb;38(1):37-42.
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Syntheses of L-tyrosine-related amino acids by tyrosine phenol-lyase of Citrobacter intermedius.中间柠檬酸杆菌酪氨酸酚裂解酶合成L-酪氨酸相关氨基酸
Eur J Biochem. 1981 Jun;117(1):33-40. doi: 10.1111/j.1432-1033.1981.tb06299.x.
7
Mechanistic deductions from kinetic isotope effects and pH studies of pyridoxal phosphate dependent carbon-carbon lyases: Erwinia herbicola and Citrobacter freundii tyrosine phenol-lyase.基于动力学同位素效应和pH研究对磷酸吡哆醛依赖性碳-碳裂解酶的机理推导:草生欧文氏菌和弗氏柠檬酸杆菌酪氨酸酚裂解酶
Biochemistry. 1988 Sep 20;27(19):7333-8. doi: 10.1021/bi00419a023.
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[Isolation and properties of tyrosine phenol-lyase from Citrobacter intermedius].[中间柠檬酸杆菌酪氨酸酚裂解酶的分离与性质]
Biokhimiia. 1984 Jan;49(1):32-7.
9
Transamination catalysed by tyrosine phenol-lyase from Citrobacter intermedius.中间柠檬酸杆菌的酪氨酸酚裂解酶催化的转氨作用。
Eur J Biochem. 1987 Dec 30;170(1-2):311-6. doi: 10.1111/j.1432-1033.1987.tb13701.x.
10
The crystal structure of Citrobacter freundii tyrosine phenol-lyase complexed with 3-(4'-hydroxyphenyl)propionic acid, together with site-directed mutagenesis and kinetic analysis, demonstrates that arginine 381 is required for substrate specificity.弗氏柠檬酸杆菌酪氨酸酚裂解酶与3-(4'-羟基苯基)丙酸复合的晶体结构,结合定点突变和动力学分析,表明精氨酸381是底物特异性所必需的。
Biochemistry. 1997 May 27;36(21):6502-10. doi: 10.1021/bi962917+.

引用本文的文献

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