DBToolkit：用于以肽为中心的蛋白质组学的蛋白质数据库处理
DBToolkit: processing protein databases for peptide-centric proteomics.
作者信息
Martens Lennart, Vandekerckhove Joël, Gevaert Kris
机构信息
Department of Biochemistry, Faculty of Medicine and Health Sciences, Ghent University, A. Baertsoenkaai 3, B-9000 Ghent, Belgium.
出版信息
Bioinformatics. 2005 Sep 1;21(17):3584-5. doi: 10.1093/bioinformatics/bti588. Epub 2005 Jul 19.
UNLABELLED
DBToolkit is a user-friendly, easily extensible tool that allows the processing of protein sequence databases to peptide-centric sequence databases. This processing is primarily aimed at enhancing the useful information content of these databases for use as optimized search spaces for efficient identification of peptide fragmentation spectra obtained by mass spectrometry. In addition, DBToolkit can be used to reliably solve a range of other typical tasks in processing sequence databases.
AVAILABILITY
DBToolkit is open source under the GNU GPL license. The source code, full user and developer documentation and cross-platform binaries are freely downloadable from the project website at http://genesis.UGent.be/dbtoolkit/
CONTACT
未标注
DBToolkit是一个用户友好、易于扩展的工具，可将蛋白质序列数据库处理为以肽为中心的序列数据库。这种处理主要旨在增加这些数据库的有用信息内容，用作优化的搜索空间，以便高效识别通过质谱获得的肽片段谱。此外，DBToolkit可用于可靠地解决处理序列数据库中的一系列其他典型任务。
可用性
DBToolkit在GNU GPL许可下开源。源代码、完整的用户和开发者文档以及跨平台二进制文件可从项目网站http://genesis.UGent.be/dbtoolkit/免费下载。
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