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用于检测粉蚧中葡糖醋杆菌属物种的分子引物和探针的设计、开发及应用

Design, development, and use of molecular primers and probes for the detection of Gluconacetobacter species in the pink sugarcane mealybug.

作者信息

Franke-Whittle Ingrid H, O'Shea Michael G, Leonard Graham J, Sly Lindsay I

机构信息

Centre for Bacterial Diversity and Identification, Department of Microbiology and Parasitology, The University of Queensland, Brisbane, Qld. 4072, Australia.

出版信息

Microb Ecol. 2005 Jul;50(1):128-39. doi: 10.1007/s00248-004-0138-z. Epub 2005 Jul 27.

Abstract

Molecular tools for the species-specific detection of Gluconacetobacter sacchari, Gluconacetobacter diazotrophicus, and Gluconacetobacter liquefaciens from the pink sugarcane mealybug (PSMB) Saccharicoccus sacchari Cockerell (Homiptera: Pseudococcidae) were developed and used in polymerase chain reactions (PCR) and in fluorescence in situ hybridizations (FISH) to better understand the microbial diversity and the numerical significance of the acetic acid bacteria in the PSMB microenvironment. The presence of these species in the PSMB occurred over a wide range of sites, but not in all sites in sugarcane-growing areas of Queensland, Australia, and was variable over time. Molecular probes for use in FISH were also designed for the three acetic acid bacterial species, and shown to be specific only for the target species. Use of these probes in FISH of "squashed" whole mealybugs indicated that these acetic acid bacteria species represent only a small proportion of the microbial population of the PSMB. Despite the detection of Glac. sacchari, Glac. diazotrophicus, and Glac. liquefaciens by PCR from different mealybugs isolated at various times and from various sugarcane-growing areas in Queensland, Australia, these bacteria do not appear to be significant commensals in the PSMB environment.

摘要

开发了用于从粉蚧(PSMB)甘蔗粉蚧(Saccharicoccus sacchari Cockerell,半翅目:粉蚧科)中特异性检测嗜糖葡糖醋杆菌、固氮葡糖醋杆菌和液化葡糖醋杆菌的分子工具,并将其用于聚合酶链反应(PCR)和荧光原位杂交(FISH),以更好地了解PSMB微环境中醋酸菌的微生物多样性和数量意义。这些物种在PSMB中的存在发生在广泛的地点,但在澳大利亚昆士兰州甘蔗种植区的所有地点并非都有,并且随时间变化。还为这三种醋酸菌设计了用于FISH的分子探针,并证明仅对目标物种具有特异性。在“挤压”的整个粉蚧的FISH中使用这些探针表明,这些醋酸菌物种仅占PSMB微生物种群的一小部分。尽管通过PCR从澳大利亚昆士兰州不同时间和不同甘蔗种植区分离的不同粉蚧中检测到了嗜糖葡糖醋杆菌、固氮葡糖醋杆菌和液化葡糖醋杆菌,但这些细菌在PSMB环境中似乎不是重要的共生菌。

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