• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酿酒酵母中Ty元件介导的基因组进化

Genome evolution mediated by Ty elements in Saccharomyces.

作者信息

Garfinkel D J

机构信息

National Cancer Institute, Frederick, MD 21702-1201, USA.

出版信息

Cytogenet Genome Res. 2005;110(1-4):63-9. doi: 10.1159/000084939.

DOI:10.1159/000084939
PMID:16093659
Abstract

How mobile genetic elements molded eukaryotic genomes is a key evolutionary question that gained wider popularity when mobile DNA sequences were shown to comprise about half of the human genome. Although Saccharomyces cerevisiae does not suffer such "genome obesity", five families of LTR-retrotransposons, Ty1, Ty2, Ty3, Ty4, and Ty5 elements, comprise about 3% of its genome. The availability of complete genome sequences from several Saccharomyces species, including members of the closely related sensu stricto group, present new opportunities for analyzing molecular mechanisms for chromosome evolution, speciation, and reproductive isolation. In this review I present key experiments from both the pre- and current genomic sequencing eras suggesting how Ty elements mediate genome evolution.

摘要

移动遗传元件如何塑造真核生物基因组是一个关键的进化问题,当移动DNA序列被证明约占人类基因组的一半时,这个问题受到了更广泛的关注。尽管酿酒酵母没有这种“基因组肥胖”问题,但五个长末端重复序列逆转座子家族,即Ty1、Ty2、Ty3、Ty4和Ty5元件,约占其基因组的3%。包括密切相关的狭义组成员在内的几种酿酒酵母物种的完整基因组序列的可得性,为分析染色体进化、物种形成和生殖隔离的分子机制提供了新的机会。在这篇综述中,我展示了基因组测序前和当前时代的关键实验,这些实验揭示了Ty元件如何介导基因组进化。

相似文献

1
Genome evolution mediated by Ty elements in Saccharomyces.酿酒酵母中Ty元件介导的基因组进化
Cytogenet Genome Res. 2005;110(1-4):63-9. doi: 10.1159/000084939.
2
Comparative genomics and evolutionary dynamics of Saccharomyces cerevisiae Ty elements.酿酒酵母Ty元件的比较基因组学与进化动力学
Genetica. 1999;107(1-3):3-13.
3
Genomic evolution of the long terminal repeat retrotransposons in hemiascomycetous yeasts.半子囊菌酵母中长末端重复逆转录转座子的基因组进化
Genome Res. 2002 Jun;12(6):930-43. doi: 10.1101/gr.219202.
4
Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence.转座元件与基因组组织:通过酿酒酵母全基因组序列揭示的逆转座子综合调查
Genome Res. 1998 May;8(5):464-78. doi: 10.1101/gr.8.5.464.
5
Happy together: the life and times of Ty retrotransposons and their hosts.和谐共生:Ty逆转座子及其宿主的生活与时代
Cytogenet Genome Res. 2005;110(1-4):70-90. doi: 10.1159/000084940.
6
Evolutionary genomics of transposable elements in Saccharomyces cerevisiae.酵母中转座元件的进化基因组学。
PLoS One. 2012;7(11):e50978. doi: 10.1371/journal.pone.0050978. Epub 2012 Nov 30.
7
Analysis of a Ty1-less variant of Saccharomyces paradoxus: the gain and loss of Ty1 elements.奇异酵母Ty1缺失变体的分析:Ty1元件的获得与丢失
Yeast. 2004 Jun;21(8):649-60. doi: 10.1002/yea.1129.
8
Evidence for the role of recombination in the regulatory evolution of Saccharomyces cerevisiae Ty elements.重组在酿酒酵母Ty元件调控进化中作用的证据。
J Mol Evol. 1998 Jul;47(1):14-20. doi: 10.1007/pl00006358.
9
Light and shadow on the mechanisms of integration site selection in yeast Ty retrotransposon families.酵母 Ty 反转录转座子家族整合位点选择机制中的光与影。
Curr Genet. 2021 Jun;67(3):347-357. doi: 10.1007/s00294-021-01154-7. Epub 2021 Feb 15.
10
Inferences of evolutionary relationships from a population survey of LTR-retrotransposons and telomeric-associated sequences in the Saccharomyces sensu stricto complex.基于酿酒酵母严格意义复合体中LTR反转录转座子和端粒相关序列的群体调查对进化关系的推断。
Yeast. 2005 Feb;22(3):177-92. doi: 10.1002/yea.1200.

引用本文的文献

1
Metabolic engineering of Saccharomyces cerevisiae for the biosynthesis of a fungal pigment from the phytopathogenic fungus Cladosporium phlei.酿酒酵母的代谢工程用于从植物病原真菌草生枝孢菌生物合成一种真菌色素。
J Biol Eng. 2024 May 13;18(1):33. doi: 10.1186/s13036-024-00429-0.
2
Expression of virus-like particles (VLPs) of foot-and-mouth disease virus (FMDV) using Saccharomyces cerevisiae.利用酿酒酵母表达口蹄疫病毒样颗粒(VLPs)。
Appl Microbiol Biotechnol. 2024 Dec;108(1):81. doi: 10.1007/s00253-023-12902-9. Epub 2024 Jan 9.
3
Dna2 removes toxic ssDNA-RPA filaments generated from meiotic recombination-associated DNA synthesis.
Dna2 去除由减数分裂重组相关 DNA 合成产生的有毒 ssDNA-RPA 丝。
Nucleic Acids Res. 2023 Aug 25;51(15):7914-7935. doi: 10.1093/nar/gkad537.
4
Structure of a Ty1 restriction factor reveals the molecular basis of transposition copy number control.Ty1 限制因子的结构揭示了转座拷贝数控制的分子基础。
Nat Commun. 2021 Sep 22;12(1):5590. doi: 10.1038/s41467-021-25849-0.
5
Resistance Mechanisms of to Commercial Formulations of Glyphosate Involve DNA Damage Repair, the Cell Cycle, and the Cell Wall Structure.对草甘膦商业制剂的抗性机制涉及DNA损伤修复、细胞周期和细胞壁结构。
G3 (Bethesda). 2020 Jun 1;10(6):2043-2056. doi: 10.1534/g3.120.401183.
6
Evolution of Ty1 copy number control in yeast by horizontal transfer and recombination.酵母中 Ty1 拷贝数控制的水平转移和重组进化。
PLoS Genet. 2020 Feb 21;16(2):e1008632. doi: 10.1371/journal.pgen.1008632. eCollection 2020 Feb.
7
Retrotransposon targeting to RNA polymerase III-transcribed genes.逆转录转座子靶向RNA聚合酶III转录的基因。
Mob DNA. 2018 Apr 23;9:14. doi: 10.1186/s13100-018-0119-2. eCollection 2018.
8
Control of yeast retrotransposons mediated through nucleoporin evolution.通过核孔蛋白进化对酵母逆转录转座子的控制。
PLoS Genet. 2018 Apr 25;14(4):e1007325. doi: 10.1371/journal.pgen.1007325. eCollection 2018 Apr.
9
Cross-Regulation between Transposable Elements and Host DNA Replication.转座元件与宿主DNA复制之间的交叉调控
Viruses. 2017 Mar 21;9(3):57. doi: 10.3390/v9030057.
10
Determinants of Genomic RNA Encapsidation in the Saccharomyces cerevisiae Long Terminal Repeat Retrotransposons Ty1 and Ty3.酿酒酵母长末端重复逆转录转座子Ty1和Ty3中基因组RNA包装的决定因素
Viruses. 2016 Jul 14;8(7):193. doi: 10.3390/v8070193.