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使用配备图像分析荧光显微镜的冷却电荷耦合器件相机测量海洋微微型浮游生物的细胞大小。

Measurement of marine picoplankton cell size by using a cooled, charge-coupled device camera with image-analyzed fluorescence microscopy.

作者信息

Viles C L, Sieracki M E

机构信息

School of Marine Science, College of William and Mary, Gloucester Point, Virginia 23062.

出版信息

Appl Environ Microbiol. 1992 Feb;58(2):584-92. doi: 10.1128/aem.58.2.584-592.1992.

DOI:10.1128/aem.58.2.584-592.1992
PMID:1610183
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC195288/
Abstract

Accurate measurement of the biomass and size distribution of picoplankton cells (0.2 to 2.0 microns) is paramount in characterizing their contribution to the oceanic food web and global biogeochemical cycling. Image-analyzed fluorescence microscopy, usually based on video camera technology, allows detailed measurements of individual cells to be taken. The application of an imaging system employing a cooled, slow-scan charge-coupled device (CCD) camera to automated counting and sizing of individual picoplankton cells from natural marine samples is described. A slow-scan CCD-based camera was compared to a video camera and was superior for detecting and sizing very small, dim particles such as fluorochrome-stained bacteria. Several edge detection methods for accurately measuring picoplankton cells were evaluated. Standard fluorescent microspheres and a Sargasso Sea surface water picoplankton population were used in the evaluation. Global thresholding was inappropriate for these samples. Methods used previously in image analysis of nanoplankton cells (2 to 20 microns) also did not work well with the smaller picoplankton cells. A method combining an edge detector and an adaptive edge strength operator worked best for rapidly generating accurate cell sizes. A complete sample analysis of more than 1,000 cells averages about 50 min and yields size, shape, and fluorescence data for each cell. With this system, the entire size range of picoplankton can be counted and measured.

摘要

准确测量微微型浮游生物细胞(0.2至2.0微米)的生物量和大小分布,对于描述它们对海洋食物网和全球生物地球化学循环的贡献至关重要。图像分析荧光显微镜,通常基于摄像机技术,能够对单个细胞进行详细测量。本文描述了一种采用冷却的慢扫描电荷耦合器件(CCD)相机的成像系统,用于对天然海洋样本中的单个微微型浮游生物细胞进行自动计数和大小测量。将基于慢扫描CCD的相机与摄像机进行了比较,结果表明前者在检测和测量非常小的、暗淡的颗粒(如荧光染色细菌)方面更具优势。评估了几种用于精确测量微微型浮游生物细胞的边缘检测方法。评估过程中使用了标准荧光微球和马尾藻海表层水微微型浮游生物群体。全局阈值处理不适用于这些样本。先前用于纳米浮游生物细胞(2至20微米)图像分析的方法,对于更小的微微型浮游生物细胞也效果不佳。一种结合边缘检测器和自适应边缘强度算子的方法,在快速生成准确的细胞大小方面效果最佳。对1000多个细胞进行完整的样本分析平均约需50分钟,并能得出每个细胞的大小、形状和荧光数据。使用该系统,可以对微微型浮游生物的整个大小范围进行计数和测量。

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