Onuffer J J, Kirsch J F
Department of Molecular and Cell Biology, University of California, Berkeley 94720.
Protein Eng. 1994 Mar;7(3):413-24. doi: 10.1093/protein/7.3.413.
The strictly conserved active site residue, Asp222, which forms a hydrogen-bonded salt bridge with the pyridine nitrogen atom of the pyridoxal 5' phosphate (PLP) co-factor of aspartate aminotransferase (AATase), was replaced with alanine (D222A) in the Escherichia coli enzyme. The D222A mutant exhibits non-hyberbolic saturation behavior with amino acid substrates which appear as apparent negative cooperativity in steady-state kinetic analyses. Single turnover progress curves for D222A are well described by the sum of two exponentials, contrasting with the monophasic kinetics of the wild-type enzyme. An active/inactive heterodimer containing the D222A mutation retains this biphasic kinetic response, proving that the observed cooperativity is not the result of induced allostery. The anomalous behavior is explained by a hysteretic kinetic model involving two slowly interconverting enzyme forms, only one of which is catalytically competent. The slow functional transition between the two forms has a half-life of approximately 10 mins. Preincubation of the mutant with the dicarboxylic inhibitor maleate shifts the equilibrium population of the enzyme towards the catalytically active form, suggesting that the slow transition is related to the domain closure known to occur upon association of this inhibitor with the wild-type enzyme. The importance of Asp222 in the chemical steps of transamination is confirmed by the approximately 10(5)-fold decrease in catalytic competence in the D222A mutant, and by the large primary C alpha-deuterium kinetic isotope effect (6.7 versus 2.2 for the wild-type). The transamination activity of the D222A mutant is enhanced 4- to 20-fold by reconstitution with the co-factor analog N-methylpyridoxal-5'-phosphate (N-MePLP), and the C alpha-proton abstraction step is less rate determining, as evidenced by the decrease in the primary kinetic isotope effect from 6.7 to 2.3. These results suggest that the conserved interaction between the protonated pyridine nitrogen of PLP and the negatively charged carboxylate of Asp222 is important not only for efficient C alpha-proton abstraction, but also for conformational transitions concomitant with the transamination process.
在大肠杆菌的天冬氨酸转氨酶(AATase)中,严格保守的活性位点残基天冬氨酸222(Asp222)与磷酸吡哆醛(PLP)辅因子的吡啶氮原子形成氢键盐桥,该残基被丙氨酸取代(D222A)。D222A突变体对氨基酸底物表现出非双曲线饱和行为,在稳态动力学分析中表现为明显的负协同效应。D222A的单周转进程曲线可用两个指数之和很好地描述,这与野生型酶的单相动力学形成对比。含有D222A突变的活性/无活性异二聚体保留了这种双相动力学响应,证明观察到的协同效应不是诱导变构的结果。这种异常行为由一个滞后动力学模型解释,该模型涉及两种缓慢相互转化的酶形式,其中只有一种具有催化活性。两种形式之间缓慢的功能转变半衰期约为10分钟。用二羧酸抑制剂马来酸对突变体进行预孵育,会使酶的平衡群体向催化活性形式转变,这表明缓慢转变与已知该抑制剂与野生型酶结合时发生的结构域闭合有关。D222A突变体催化活性下降约10^5倍,以及较大的一级Cα-氘动力学同位素效应(野生型为2.2,D222A为6.7),证实了Asp222在转氨化学步骤中的重要性。用辅因子类似物N-甲基磷酸吡哆醛(N-MePLP)重构后,D222A突变体的转氨活性提高了4至20倍,并且一级动力学同位素效应从6.7降至2.3,这表明Cα-质子夺取步骤的速率决定性降低。这些结果表明,PLP质子化吡啶氮与Asp222带负电荷的羧酸盐之间保守的相互作用不仅对有效的Cα-质子夺取很重要,而且对转氨过程伴随的构象转变也很重要。