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本文引用的文献

1
Change in bacterial community structure during in situ biostimulation of subsurface sediment cocontaminated with uranium and nitrate.铀和硝酸盐共污染的地下沉积物原位生物刺激过程中细菌群落结构的变化
Appl Environ Microbiol. 2004 Aug;70(8):4911-20. doi: 10.1128/AEM.70.8.4911-4920.2004.
2
Role of metal-reducing bacteria in arsenic release from Bengal delta sediments.金属还原菌在孟加拉三角洲沉积物砷释放中的作用。
Nature. 2004 Jul 1;430(6995):68-71. doi: 10.1038/nature02638.
3
High overall diversity and dominance of microdiverse relationships in salt marsh sulphate-reducing bacteria.盐沼硫酸盐还原菌中微观多样关系的高总体多样性和主导地位。
Environ Microbiol. 2004 Jul;6(7):686-98. doi: 10.1111/j.1462-2920.2004.00600.x.
4
Reactive transport modelling of biogeochemical processes and carbon isotope geochemistry inside a landfill leachate plume.垃圾渗滤液羽流内生物地球化学过程与碳同位素地球化学的反应性输运模拟
J Contam Hydrol. 2004 Jun;70(3-4):249-69. doi: 10.1016/j.jconhyd.2003.09.003.
5
Diversity of Geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses.通过16S rDNA分析确定栖息于金属污染淡水湖沉积物中的地杆菌科物种的多样性。
Microb Ecol. 2003 Aug;46(2):257-69. doi: 10.1007/s00248-005-8002-3.
6
Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer.刺激地杆菌属物种的原位活性以从铀污染含水层的地下水中去除铀。
Appl Environ Microbiol. 2003 Oct;69(10):5884-91. doi: 10.1128/AEM.69.10.5884-5891.2003.
7
Biogeochemistry and isotope geochemistry of a landfill leachate plume.垃圾渗滤液羽状物的生物地球化学与同位素地球化学
J Contam Hydrol. 2003 Sep;65(3-4):245-68. doi: 10.1016/S0169-7722(03)00003-2.
8
Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments.与铀污染含水层沉积物中异化金属还原刺激相关的地杆菌科成员的富集。
Appl Environ Microbiol. 2002 May;68(5):2300-6. doi: 10.1128/AEM.68.5.2300-2306.2002.
9
Geobacter bremensis sp. nov. and Geobacter pelophilus sp. nov., two dissimilatory ferric-iron-reducing bacteria.布雷姆希氏地杆菌新种和嗜泥地杆菌新种,两种异化铁还原菌。
Int J Syst Evol Microbiol. 2001 Sep;51(Pt 5):1805-1808. doi: 10.1099/00207713-51-5-1805.
10
Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer.垃圾渗滤液污染含水层中微生物群落结构与水化学之间的关系
Appl Environ Microbiol. 2001 Oct;67(10):4619-29. doi: 10.1128/AEM.67.10.4619-4629.2001.

在受邻近垃圾填埋场污染的铁还原含水层中,地杆菌科群落组成与水化学和生物降解有关。

Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill.

作者信息

Lin Bin, Braster Martin, van Breukelen Boris M, van Verseveld Henk W, Westerhoff Hans V, Röling Wilfred F M

机构信息

Department of Molecular Cell Physiology, Faculty of Earth and Life Sciences, Vrije Universiteit, De Boelelaan 1085, NL-1081 HV Amsterdam, The Netherlands.

出版信息

Appl Environ Microbiol. 2005 Oct;71(10):5983-91. doi: 10.1128/AEM.71.10.5983-5991.2005.

DOI:10.1128/AEM.71.10.5983-5991.2005
PMID:16204512
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1266018/
Abstract

Relationships between community composition of the iron-reducing Geobacteraceae, pollution levels, and the occurrence of biodegradation were established for an iron-reducing aquifer polluted with landfill leachate by using cultivation-independent Geobacteraceae 16S rRNA gene-targeting techniques. Numerical analysis of denaturing gradient gel electrophoresis (DGGE) profiles and sequencing revealed a high Geobacteraceae diversity and showed that community composition within the leachate plume differed considerably from that of the unpolluted aquifer. This suggests that pollution has selected for specific species out of a large pool of Geobacteraceae. DGGE profiles of polluted groundwater taken near the landfill (6- to 39-m distance) clustered together. DGGE profiles from less-polluted groundwater taken further downstream did not fall in the same cluster. Several individual DGGE bands were indicative of either the redox process or the level of pollution. This included a pollution-indicative band that dominated the DGGE profiles from groundwater samples taken close to the landfill (6 to 39 m distance). The clustering of these profiles and the dominance by a single DGGE band corresponded to the part of the aquifer where organic micropollutants and reactive dissolved organic matter were attenuated at relatively high rates.

摘要

通过使用不依赖培养的靶向地杆菌科16S rRNA基因的技术,确定了受垃圾渗滤液污染的铁还原含水层中,铁还原地杆菌科的群落组成、污染水平和生物降解发生情况之间的关系。变性梯度凝胶电泳(DGGE)图谱的数值分析和测序显示,地杆菌科具有高度的多样性,并表明渗滤液羽流中的群落组成与未受污染的含水层有很大差异。这表明污染从大量的地杆菌科物种中选择了特定的物种。在垃圾填埋场附近(距离6至39米)采集的受污染地下水的DGGE图谱聚集在一起。从下游更远位置采集的污染程度较轻的地下水的DGGE图谱没有落在同一个簇中。几个单独的DGGE条带表明了氧化还原过程或污染水平。这包括一个指示污染的条带,它在靠近垃圾填埋场(距离6至39米)采集的地下水样本的DGGE图谱中占主导地位。这些图谱的聚类以及单个DGGE条带的主导地位与含水层中有机微污染物和活性溶解有机物以相对较高速率衰减的部分相对应。