Department of Molecular Cell Physiology, Faculty of Earth and Life Sciences, VU University Amsterdam, Amsterdam, The Netherlands.
Environ Microbiol. 2011 May;13(5):1216-27. doi: 10.1111/j.1462-2920.2010.02421.x. Epub 2011 Jan 31.
Natural attenuation of the mono-aromates benzene, toluene, ethylbenzene and xylene occurs under iron-reducing conditions in a leachate-contaminated aquifer near the Banisveld landfill, the Netherlands. The diversity of mono-aromate-degrading microorganisms was studied by targeting functional genes encoding benzylsuccinate synthase α-subunit (bssA) and 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase (bamA). Sixty-four bssA and 188 bamA variants were sequenced from groundwater sampled along the pollution plume in 1999 and 2004. Species containing bssA sequences closest affiliated (> 91%) with the betaprotebacterium Georgfuchsia toluolica were the dominant alkylbenzene degraders (89% of bssA sequences). bssA genes were found at more than 10-fold lower copy numbers than bamA genes, of which only a small fraction (< 2%) was closely related to the genes of Georgfuchsia. bamA gene diversity was high and bamA-based community composition was primarily affected by dissolved organic carbon (DOC) and ferrous iron concentrations. bamA sequences closest related to Geobacteraceae were dominantly (43.2%) observed and the presence of Geobacteraceae-related bamA sequences was associated with DOC. Our results indicate a key role for specialized Georgfuchsia spp. in the degradation of alkylbenzenes, whereas Geobacteraceae are involved in degradation of aromatics other than toluene and xylene.
在荷兰 Banisveld 垃圾填埋场附近受沥滤液污染的含水层中,在还原铁条件下,单芳烃苯、甲苯、乙苯和二甲苯会发生自然衰减。通过靶向编码苄基琥珀酸合酶α亚基(bssA)和 6-氧代环己-1-烯-1-羰基-CoA 水解酶(bamA)的功能基因,研究了单芳烃降解微生物的多样性。从 1999 年和 2004 年沿污染羽流采集的地下水中共测序了 64 个 bssA 和 188 个 bamA 变体。与 betaprotebacterium Georgfuchsia toluolica 序列最接近 (> 91%)的物种是主要的烷基苯降解菌(89%的 bssA 序列)。bssA 基因的拷贝数比 bamA 基因低 10 多倍,其中只有一小部分 (< 2%)与 Georgfuchsia 的基因密切相关。bamA 基因多样性很高,基于 bamA 的群落组成主要受溶解有机碳 (DOC) 和亚铁浓度的影响。与 Geobacteraceae 最接近的 bamA 序列主要观察到 (43.2%),Geobacteraceae 相关的 bamA 序列的存在与 DOC 相关。我们的结果表明,专门的 Georgfuchsia spp. 在降解烷基苯方面发挥着关键作用,而 Geobacteraceae 则参与了除甲苯和二甲苯以外的芳烃的降解。