Lu Lin, Roberts George G, Oszust Cynthia, Hudson Alan P
Department of Immunology and Microbiology, Wayne State University School of Medicine, Gordon H. Scott Hall, 540 East Canfield Ave., Detroit, MI 48201, USA.
Curr Genet. 2005 Oct;48(4):235-46. doi: 10.1007/s00294-005-0023-4. Epub 2005 Nov 4.
A putative yeast mitochondrial upstream activating sequence (UAS) was used in a one-hybrid screening procedure that identified the YJR127C ORF on chromosome X. This gene was previously designated ZMS1 and is listed as a transcription factor on the SGD website. Real time RT-PCR assays showed that expression of YJR127C/ZMS1 was glucose-repressible, and a deletion mutant for the gene showed a growth defect on glycerol-based but not on glucose- or ethanol-based medium. Real time RT-PCR analyses identified severely attenuated transcript levels from GUT1 and GUT2 to be the source of that growth defect, the products of GUT1 and GUT2 are required for glycerol utilization. mRNA levels from a large group of mitochondria- and respiration-related nuclear genes also were shown to be attenuated in the deletion mutant. Importantly, transcript levels from the mitochondrial OLI1 gene, which has an associated organellar UAS, were attenuated in the DeltaYJR127C mutant during glycerol-based growth, but those from COX3 (OXI2), which lacks an associated mitochondrial UAS, were not. Transcriptome analysis of the glycerol-grown deletion mutant showed that genes in several metabolic and other categories are affected by loss of this gene product, including protein transport, signal transduction, and others. Thus, the product of YJR127C/ZMS1 is involved in transcriptional control for genes in both cellular genetic compartments, many of which specify products required for glycerol-based growth, respiration, and other functions.
一个假定的酵母线粒体上游激活序列(UAS)被用于一种单杂交筛选程序,该程序在X染色体上鉴定出了YJR127C开放阅读框。这个基因先前被命名为ZMS1,并且在SGD网站上被列为一种转录因子。实时逆转录聚合酶链反应(RT-PCR)分析表明,YJR127C/ZMS1的表达受葡萄糖抑制,该基因的缺失突变体在基于甘油的培养基上生长有缺陷,但在基于葡萄糖或乙醇的培养基上没有。实时RT-PCR分析确定,GUT1和GUT2转录水平严重减弱是该生长缺陷的根源,甘油利用需要GUT1和GUT2的产物。一大组与线粒体和呼吸相关的核基因的mRNA水平在缺失突变体中也显示出减弱。重要的是,在基于甘油的生长过程中,具有相关细胞器UAS的线粒体OLI1基因的转录水平在DeltaYJR127C突变体中减弱,但缺乏相关线粒体UAS的COX3(OXI2)基因的转录水平没有减弱。对基于甘油生长的缺失突变体的转录组分析表明,几个代谢和其他类别的基因受到该基因产物缺失的影响,包括蛋白质转运、信号转导等。因此,YJR127C/ZMS1的产物参与了两个细胞遗传区室中基因的转录控制,其中许多基因指定了基于甘油的生长、呼吸和其他功能所需的产物。