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黄石硫氢杆菌新种(Sulfurihydrogenibium yellowstonense sp. nov.),一种来自黄石国家公园的极端嗜热、兼性异养、硫氧化细菌,以及对硫氢杆菌属、地下硫氢杆菌和亚速尔硫氢杆菌的修订描述。

Sulfurihydrogenibium yellowstonense sp. nov., an extremely thermophilic, facultatively heterotrophic, sulfur-oxidizing bacterium from Yellowstone National Park, and emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum and Sulfurihydrogenibium azorense.

作者信息

Nakagawa S, Shtaih Z, Banta A, Beveridge T J, Sako Y, Reysenbach A-L

机构信息

Laboratory of Marine Microbiology, Graduate School of Agriculture, Kyoto University, Oiwake-cho, Kitashirakawa, Sakyo-ku, Kyoto 606-8502, Japan.

Department of Biology, Portland Sate University, PO Box 751, Portland, OR 97207-0751, USA.

出版信息

Int J Syst Evol Microbiol. 2005 Nov;55(Pt 6):2263-2268. doi: 10.1099/ijs.0.63708-0.

Abstract

A novel thermophilic, sulfur-oxidizing Gram-negative bacterium, designated strain SS-5T, was isolated from the Calcite Hot Springs in Yellowstone National Park, USA. The cells were motile rods (1.2-2.8 microm long and 0.6-0.8 microm wide). The new isolate was a facultative heterotroph capable of using elemental sulfur or thiosulfate as an electron donor and O2 (1-18 %; optimum 6 %, v/v) as an electron acceptor. Hydrogen did not support growth. The isolate grew autotrophically with CO2. In addition, strain SS-5T utilized various organic carbon sources such as yeast extract, tryptone, sugars, amino acids and organic acids. Growth was observed between 55 and 78 degrees C (optimum 70 degrees C; 3.5 h doubling time), pH 6.0 and 8.0 (optimum pH 7.5), and 0 and 0.6 % (w/v) NaCl (optimum 0 %). The G+C content of the genomic DNA was 32 mol%. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the isolate was a member of the genus Sulfurihydrogenibium. On the basis of the physiological and molecular characteristics of the new isolate, we propose the name Sulfurihydrogenibium yellowstonense sp. nov. with SS-5T (=JCM 12773T=OCM 840T) as the type strain. In addition, emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum and Sulfurihydrogenibium azorense are proposed.

摘要

从美国黄石国家公园的方解石温泉中分离出一株新型嗜热、氧化硫革兰氏阴性细菌,命名为菌株SS-5T。细胞为能动杆菌(长1.2 - 2.8微米,宽0.6 - 0.8微米)。该新分离株是兼性异养菌,能够利用元素硫或硫代硫酸盐作为电子供体,以O2(1 - 18%;最适6%,v/v)作为电子受体。氢气不能支持其生长。该分离株能以CO2进行自养生长。此外,菌株SS-5T利用多种有机碳源,如酵母提取物、胰蛋白胨、糖类、氨基酸和有机酸。在55至78℃(最适70℃;倍增时间3.5小时)、pH 6.0至8.0(最适pH 7.5)以及0至0.6%(w/v)NaCl(最适0%)条件下可观察到生长。基因组DNA的G+C含量为32 mol%。基于16S rRNA基因序列的系统发育分析表明,该分离株是硫氢还原菌属的一个成员。根据新分离株的生理和分子特征,我们提出将其命名为黄石硫氢还原菌(Sulfurihydrogenibium yellowstonense)新种,以SS-5T(=JCM 12773T=OCM 840T)作为模式菌株。此外,还对硫氢还原菌属、地下硫氢还原菌和亚速尔硫氢还原菌进行了修订描述。

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