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表皮生长因子信号传导定量建模中的当前挑战。

Current challenges in quantitative modeling of epidermal growth factor signaling.

作者信息

Breitling Rainer, Hoeller Daniela

机构信息

Groningen Bioinformatics Centre, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands.

出版信息

FEBS Lett. 2005 Nov 21;579(28):6289-94. doi: 10.1016/j.febslet.2005.10.034. Epub 2005 Nov 2.

Abstract

Over the last decade, epidermal growth factor (EGF) signaling has been used repeatedly as a test-bed for pioneering computational systems biology. Recent breakthroughs in our molecular understanding of EGF signaling pose new challenges for mathematical modeling strategies. Three key areas emerge as particularly relevant: the pervasive importance of compartmentalization and endosomal trafficking; the complexity of signalosome complexes; and the regulatory influence of diffusion and spatiality. Each one of them demands a drastic change in current computational approaches. We discuss recent developments in the field that address these emerging aspects in a new generation of more realistic - and potential more useful - models of EGF signaling.

摘要

在过去十年中,表皮生长因子(EGF)信号通路一直被反复用作开创性计算系统生物学的试验平台。我们对EGF信号通路的分子理解方面的最新突破,对数学建模策略提出了新的挑战。有三个关键领域显得尤为重要:区室化和内体运输的普遍重要性;信号小体复合物的复杂性;以及扩散和空间性的调节影响。它们每一个都要求当前的计算方法发生巨大变革。我们讨论了该领域的最新进展,这些进展在新一代更现实且可能更有用的EGF信号通路模型中解决了这些新出现的问题。

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