Diao Xianmin, Freeling Michael, Lisch Damon
Department of Plant and Microbial Biology, University of California, Berkeley, California, USA.
PLoS Biol. 2006 Jan;4(1):e5. doi: 10.1371/journal.pbio.0040005.
The majority of well-documented cases of horizontal transfer between higher eukaryotes involve the movement of transposable elements between animals. Surprisingly, although plant genomes often contain vast numbers of these mobile genetic elements, no evidence of horizontal transfer of a nuclear-encoded transposon between plant species has been detected to date. The most mutagenic known plant transposable element system is the Mutator system in maize. Mu-like elements (MULEs) are widespread among plants, and previous analysis has suggested that the distribution of various subgroups of MULEs is patchy, consistent with horizontal transfer. We have sequenced portions of MULE transposons from a number of species of the genus Setaria and compared them to each other and to publicly available databases. A subset of these elements is remarkably similar to a small family of MULEs in rice. A comparison of noncoding and synonymous sequences revealed that the observed similarity is not due to selection at the amino acid level. Given the amount of time separating Setaria and rice, the degree of similarity between these elements excludes the possibility of simple vertical transmission of this class of MULEs. This is the first well-documented example of horizontal transfer of any nuclear-encoded genes between higher plants.
高等真核生物之间水平转移的大多数有充分记录的案例都涉及转座元件在动物之间的移动。令人惊讶的是,尽管植物基因组通常包含大量此类可移动遗传元件,但迄今为止尚未检测到植物物种之间核编码转座子水平转移的证据。已知最具诱变作用的植物转座元件系统是玉米中的Mutator系统。类Mu元件(MULEs)在植物中广泛存在,先前的分析表明,MULEs各亚组的分布是不连续的,这与水平转移一致。我们对狗尾草属多个物种的MULE转座子部分进行了测序,并将它们相互比较以及与公开可用的数据库进行比较。这些元件的一个子集与水稻中的一小类MULEs非常相似。对非编码序列和同义序列的比较表明,观察到的相似性并非由于氨基酸水平的选择。鉴于狗尾草和水稻分化的时间,这些元件之间的相似程度排除了此类MULEs简单垂直传递的可能性。这是高等植物之间任何核编码基因水平转移的第一个有充分记录的例子。