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本文引用的文献

1
MMFF VII. Characterization of MMFF94, MMFF94s, and other widely available force fields for conformational energies and for intermolecular-interaction energies and geometries.MMFF VII. MMFF94、MMFF94s及其他广泛使用的力场在构象能、分子间相互作用能和几何结构方面的表征。
J Comput Chem. 1999 May;20(7):730-748. doi: 10.1002/(SICI)1096-987X(199905)20:7<730::AID-JCC8>3.0.CO;2-T.
2
Structure-activity relationships of dinucleotides: Potent and selective agonists of P2Y receptors.二核苷酸的结构-活性关系:P2Y 受体的有效和选择性激动剂。
Purinergic Signal. 2005 Jun;1(2):183-91. doi: 10.1007/s11302-005-0648-2. Epub 2005 Mar 7.
3
Human P2Y(6) receptor: molecular modeling leads to the rational design of a novel agonist based on a unique conformational preference.人P2Y(6)受体:分子建模基于独特的构象偏好实现了新型激动剂的合理设计。
J Med Chem. 2005 Dec 29;48(26):8108-11. doi: 10.1021/jm050911p.
4
Architecture of P2Y nucleotide receptors: structural comparison based on sequence analysis, mutagenesis, and homology modeling.P2Y核苷酸受体的结构:基于序列分析、诱变和同源建模的结构比较。
J Med Chem. 2004 Oct 21;47(22):5393-404. doi: 10.1021/jm049914c.
5
Nucleotide analogues containing 2-oxa-bicyclo[2.2.1]heptane and l-alpha-threofuranosyl ring systems: interactions with P2Y receptors.含有2-氧杂双环[2.2.1]庚烷和1-α-苏式呋喃糖环系统的核苷酸类似物:与P2Y受体的相互作用。
Bioorg Med Chem. 2004 Nov 1;12(21):5619-30. doi: 10.1016/j.bmc.2004.07.067.
6
Molecular recognition in purinergic receptors. 2. Diastereoselectivity of the h-P2Y1-receptor.嘌呤能受体中的分子识别。2. 人P2Y1受体的非对映选择性。
J Med Chem. 2004 Aug 26;47(18):4405-16. doi: 10.1021/jm049771u.
7
2-Substitution of adenine nucleotide analogues containing a bicyclo[3.1.0]hexane ring system locked in a northern conformation: enhanced potency as P2Y1 receptor antagonists.含有锁定在北构象的双环[3.1.0]己烷环系统的腺嘌呤核苷酸类似物的2-取代:作为P2Y1受体拮抗剂的效力增强。
J Med Chem. 2003 Nov 6;46(23):4974-87. doi: 10.1021/jm030127+.
8
P2-pyrimidinergic receptors and their ligands.P2-嘧啶能受体及其配体
Curr Pharm Des. 2002;8(26):2353-69. doi: 10.2174/1381612023392937.
9
2-Chloro N(6)-methyl-(N)-methanocarba-2'-deoxyadenosine-3',5'-bisphosphate is a selective high affinity P2Y(1) receptor antagonist.2-氯-N(6)-甲基-(N)-甲碳环-2'-脱氧腺苷-3',5'-二磷酸是一种选择性高亲和力P2Y(1)受体拮抗剂。
Br J Pharmacol. 2002 Apr;135(8):2004-10. doi: 10.1038/sj.bjp.0704673.
10
Methanocarba modification of uracil and adenine nucleotides: high potency of Northern ring conformation at P2Y1, P2Y2, P2Y4, and P2Y11 but not P2Y6 receptors.尿嘧啶和腺嘌呤核苷酸的甲碳硼烷修饰:在P2Y1、P2Y2、P2Y4和P2Y11受体上北环构象具有高效能,但在P2Y6受体上则不然。
J Med Chem. 2002 Jan 3;45(1):208-18. doi: 10.1021/jm010369e.

人P2Y2和P2Y4受体上核糖和碱基修饰的尿苷5'-三磷酸类似物的构效关系及分子模拟分析

Structure activity and molecular modeling analyses of ribose- and base-modified uridine 5'-triphosphate analogues at the human P2Y2 and P2Y4 receptors.

作者信息

Jacobson Kenneth A, Costanzi Stefano, Ivanov Andrei A, Tchilibon Susanna, Besada Pedro, Gao Zhan-Guo, Maddileti Savitri, Harden T Kendall

机构信息

Molecular Recognition Section, Laboratory of Bioorganic Chemistry, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.

出版信息

Biochem Pharmacol. 2006 Feb 14;71(4):540-9. doi: 10.1016/j.bcp.2005.11.010. Epub 2005 Dec 15.

DOI:10.1016/j.bcp.2005.11.010
PMID:16359641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4374482/
Abstract

With the long-term goal of developing receptor subtype-selective high affinity agonists for the uracil nucleotide-activated P2Y receptors we have carried out a series of structure activity and molecular modeling studies of the human P2Y2 and P2Y4 receptors. UTP analogues with substitutions in the 2'-position of the ribose moiety retained capacity to activate both P2Y2 and P2Y4 receptors. Certain of these analogues were equieffective for activation of both receptors whereas 2'-amino-2'-deoxy-UTP exhibited higher potency for the P2Y2 receptor and 2'-azido-UTP exhibited higher potency for the P2Y4 receptor. 4-Thio substitution of the uracil base resulted in a UTP analogue with increased potency relative to UTP for activation of both the P2Y2 and P2Y4 receptors. In contrast, 2-thio substitution and halo- or alkyl substitution in the 5-position of the uracil base resulted in molecules that were 3-30-fold more potent at the P2Y2 receptor than P2Y4 receptor. 6-Aza-UTP was a P2Y2 receptor agonist that exhibited no activity at the P2Y4 receptor. Stereoisomers of UTPalphaS and 2'-deoxy-UTPalphaS were more potent at the P2Y2 than P2Y4 receptor, and the R-configuration was favored at both receptors. Molecular docking studies revealed that the binding mode of UTP is similar for both the P2Y2 and P2Y4 receptor binding pockets with the most prominent dissimilarities of the two receptors located in the second transmembrane domain (V90 in the P2Y2 receptor and I92 in the P2Y4 receptor) and the second extracellular loop (T182 in the P2Y2 receptor and L184 in the P2Y4 receptor). In summary, this work reveals substitutions in UTP that differentially affect agonist activity at P2Y2 versus P2Y4 receptors and in combination with molecular modeling studies should lead to chemical synthesis of new receptor subtype-selective drugs.

摘要

为了实现开发尿嘧啶核苷酸激活的P2Y受体亚型选择性高亲和力激动剂的长期目标,我们对人P2Y2和P2Y4受体进行了一系列构效关系和分子模拟研究。核糖部分2'-位有取代的UTP类似物保留了激活P2Y2和P2Y4受体的能力。其中某些类似物对两种受体的激活效果相同,而2'-氨基-2'-脱氧-UTP对P2Y2受体表现出更高的效力,2'-叠氮基-UTP对P2Y4受体表现出更高的效力。尿嘧啶碱基的4-硫代取代产生了一种相对于UTP对P2Y2和P2Y4受体激活效力均增加的UTP类似物。相比之下,尿嘧啶碱基5-位的2-硫代取代以及卤代或烷基取代产生的分子对P2Y2受体的效力比对P2Y4受体高3至30倍。6-氮杂-UTP是一种P2Y2受体激动剂,对P2Y4受体无活性。UTPαS和2'-脱氧-UTPαS的立体异构体对P2Y2受体的效力比对P2Y4受体更强,并且两种受体均更倾向于R构型。分子对接研究表明,UTP在P2Y2和P2Y4受体结合口袋中的结合模式相似,两种受体最显著的差异位于第二个跨膜结构域(P2Y2受体中的V90和P2Y4受体中的I92)和第二个细胞外环(P2Y2受体中的T182和P2Y4受体中的L184)。总之,这项工作揭示了UTP中的取代对P2Y2和P2Y4受体激动剂活性有不同影响,结合分子模拟研究应能导向新型受体亚型选择性药物的化学合成。

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