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IMG:综合微生物基因组数据库和比较分析系统。

IMG: the Integrated Microbial Genomes database and comparative analysis system.

机构信息

Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, USA.

出版信息

Nucleic Acids Res. 2012 Jan;40(Database issue):D115-22. doi: 10.1093/nar/gkr1044.

Abstract

The Integrated Microbial Genomes (IMG) system serves as a community resource for comparative analysis of publicly available genomes in a comprehensive integrated context. IMG integrates publicly available draft and complete genomes from all three domains of life with a large number of plasmids and viruses. IMG provides tools and viewers for analyzing and reviewing the annotations of genes and genomes in a comparative context. IMG's data content and analytical capabilities have been continuously extended through regular updates since its first release in March 2005. IMG is available at http://img.jgi.doe.gov. Companion IMG systems provide support for expert review of genome annotations (IMG/ER: http://img.jgi.doe.gov/er), teaching courses and training in microbial genome analysis (IMG/EDU: http://img.jgi.doe.gov/edu) and analysis of genomes related to the Human Microbiome Project (IMG/HMP: http://www.hmpdacc-resources.org/img_hmp).

摘要

集成微生物基因组 (IMG) 系统是一个公共资源,用于在综合集成的背景下对公共可用基因组进行比较分析。IMG 整合了来自生命所有三个领域的公开可用的草案和完整基因组,以及大量的质粒和病毒。IMG 提供了用于在比较上下文中分析和审查基因和基因组注释的工具和查看器。自 2005 年 3 月首次发布以来,IMG 通过定期更新不断扩展其数据内容和分析功能。IMG 可在 http://img.jgi.doe.gov 上获得。配套的 IMG 系统为基因组注释的专家评审(IMG/ER:http://img.jgi.doe.gov/er)、微生物基因组分析教学课程和培训(IMG/EDU:http://img.jgi.doe.gov/edu)以及与人类微生物组计划相关的基因组分析(IMG/HMP:http://www.hmpdacc-resources.org/img_hmp)提供支持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/34be/3245086/e4062d04197c/gkr1044f1.jpg

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