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RNA编辑与可变剪接:共转录协调的重要性

RNA editing and alternative splicing: the importance of co-transcriptional coordination.

作者信息

Laurencikiene Jurga, Källman Annika M, Fong Nova, Bentley David L, Ohman Marie

机构信息

Department of Molecular Biology and Functional Genomics, Stockholm University, 106 91 Stockholm, Sweden.

出版信息

EMBO Rep. 2006 Mar;7(3):303-7. doi: 10.1038/sj.embor.7400621. Epub 2006 Jan 27.

DOI:10.1038/sj.embor.7400621
PMID:16440002
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1456888/
Abstract

The carboxy-terminal domain (CTD) of the large subunit of RNA polymerase II (pol II) is essential for several co-transcriptional pre-messenger RNA processing events, including capping, 3'-end processing and splicing. We investigated the role of the CTD of RNA pol II in the coordination of A to I editing and splicing of the ADAR2 (ADAR: adenosine deaminases that act on RNA) pre-mRNA. The auto-editing of Adar2 intron 4 by the ADAR2 adenosine deaminase is tightly coupled to splicing, as the modification of the dinucleotide AA to AI creates a new 3' splice site. Unlike other introns, the CTD is not required for efficient splicing of intron 4 at either the normal 3' splice site or the alternative site created by editing. However, the CTD is required for efficient co-transcriptional auto-editing of ADAR2 intron 4. Our results implicate the CTD in site-selective RNA editing by ADAR2 and in coordination of editing with alternative splicing.

摘要

RNA聚合酶II(pol II)大亚基的羧基末端结构域(CTD)对于几种共转录前体信使RNA加工事件至关重要,包括加帽、3'末端加工和剪接。我们研究了RNA pol II的CTD在ADAR2(ADAR:作用于RNA的腺苷脱氨酶)前体mRNA的A到I编辑与剪接协调中的作用。ADAR2腺苷脱氨酶对Adar2内含子4的自我编辑与剪接紧密偶联,因为二核苷酸AA修饰为AI会产生一个新的3'剪接位点。与其他内含子不同,无论是在正常的3'剪接位点还是由编辑产生的替代位点,CTD对于内含子4的有效剪接都不是必需的。然而,CTD对于ADAR2内含子4的有效共转录自我编辑是必需的。我们的结果表明CTD参与了ADAR2的位点选择性RNA编辑以及编辑与可变剪接的协调。

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本文引用的文献

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