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甲基弯曲菌OB3b甲烷单加氧酶B组分C末端区域在氧激活调节中的作用

Role of the C-terminal region of the B component of Methylosinus trichosporium OB3b methane monooxygenase in the regulation of oxygen activation.

作者信息

Zhang Jingyan, Lipscomb John D

机构信息

Department of Biochemistry, Molecular Biology, and Biophysics and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455, USA.

出版信息

Biochemistry. 2006 Feb 7;45(5):1459-69. doi: 10.1021/bi051721j.

Abstract

The effects of the C-terminal region of the B component (MMOB) of soluble methane monooxygenase (sMMO) from Methylosinus trichosporium OB3b on steady-state turnover, the transient kinetics of the reaction cycle, and the properties of the sMMO hydroxylase (MMOH) active site diiron cluster have been explored. MMOB is known to have many profound effects on the rate and specificity of sMMO. Past studies have revealed specific roles for the well-folded core structure of MMOB as well as the disordered N-terminal region. Here, it is shown that the disordered C-terminal region of MMOB also performs critical roles in the regulation of catalysis. Deletion mutants of MMOB missing 5, 8, and 13 C-terminal residues cause progressive decreases in the maximum steady-state turnover number, as well as lower apparent rate constants for formation of the key reaction cycle intermediate, compound Q. It is shown that this latter effect is actually due to a decrease in the rate constant for formation of an earlier intermediate, probably the hydroperoxo species, compound P. Moreover, the deletions result in substantial uncoupling at or before the P intermediate. It is proposed that this is due to competition between slow H(2)O(2) release from one of the intermediates and the reaction that carries this intermediate on to the next step in the cycle, which is slowed by the mutation. Electron paramagnetic resonance (EPR) studies of the hydroxylase component (MMOH) in the mixed valent state suggest that complexation with the mutant MMOBs alters the electronic properties of the diiron cluster in a manner distinct from that observed when wild-type MMOB is used. Active site structural changes are also suggested by a substantial decrease in the deuterium kinetic isotope effect for the reaction of Q with methane thought to be associated with a decrease in quantum tunneling in the C-H bond breaking reaction. Thus, the surface interactions between MMOH and MMOB that affect substrate oxidation and its regulation appear to require the complete MMOB C-terminal region for proper function.

摘要

已对来自嗜甲基孢囊菌OB3b的可溶性甲烷单加氧酶(sMMO)的B组分(MMOB)的C末端区域对稳态周转、反应循环的瞬态动力学以及sMMO羟化酶(MMOH)活性位点双铁簇性质的影响进行了研究。已知MMOB对sMMO的速率和特异性有许多深远影响。过去的研究揭示了MMOB折叠良好的核心结构以及无序的N末端区域的特定作用。在此表明,MMOB无序的C末端区域在催化调节中也发挥着关键作用。缺失5、8和13个C末端残基的MMOB缺失突变体导致最大稳态周转数逐步降低,以及关键反应循环中间体化合物Q形成的表观速率常数降低。结果表明,后一种效应实际上是由于较早中间体(可能是氢过氧物种,化合物P)形成的速率常数降低所致。此外,缺失导致在P中间体处或之前出现大量解偶联。据推测,这是由于一种中间体缓慢释放H₂O₂与将该中间体带入循环下一步的反应之间的竞争所致,而该反应因突变而减慢。对处于混合价态的羟化酶组分(MMOH)进行的电子顺磁共振(EPR)研究表明,与突变型MMOBs络合会以不同于使用野生型MMOB时观察到的方式改变双铁簇的电子性质。对于Q与甲烷反应的氘动力学同位素效应大幅降低也表明活性位点结构发生了变化,这被认为与C-H键断裂反应中量子隧穿的降低有关。因此,影响底物氧化及其调节的MMOH与MMOB之间的表面相互作用似乎需要完整的MMOB C末端区域才能正常发挥功能。

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