Biochemistry. 2021 Jun 29;60(25):1995-2010. doi: 10.1021/acs.biochem.1c00293. Epub 2021 Jun 8.
Soluble methane monooxygenase (sMMO) is a multicomponent metalloenzyme capable of catalyzing the fissure of the C-H bond of methane and the insertion of one atom of oxygen from O to yield methanol. Efficient multiple-turnover catalysis occurs only in the presence of all three sMMO protein components: hydroxylase (MMOH), reductase (MMOR), and regulatory protein (MMOB). The complex series of sMMO protein component interactions that regulate the formation and decay of sMMO reaction cycle intermediates is not fully understood. Here, the two tryptophan residues in MMOB and the single tryptophan residue in MMOR are converted to 5-fluorotryptophan (5FW) by expression in defined media containing 5-fluoroindole. In addition, the mechanistically significant N-terminal region of MMOB is F-labeled by reaction of the K15C variant with 3-bromo-1,1,1-trifluoroacetone (BTFA). The 5FW and BTFA modifications cause minimal structural perturbation, allowing detailed studies of the interactions with sMMOH using F NMR. Resonances from the 275 kDa complexes of sMMOH with 5FW-MMOB and BTFA-K15C-5FW-MMOB are readily detected at 5 μM labeled protein concentration. This approach shows directly that MMOR and MMOB competitively bind to sMMOH with similar values, independent of the oxidation state of the sMMOH diiron cluster. These findings suggest a new model for regulation in which the dynamic equilibration of MMOR and MMOB with sMMOH allows a transient formation of key reactive complexes that irreversibly pull the reaction cycle forward. The slow kinetics of exchange of the sMMOH:MMOB complex is proposed to prevent MMOR-mediated reductive quenching of the high-valent reaction cycle intermediate before it can react with methane.
可溶性甲烷单加氧酶(sMMO)是一种多组分金属酶,能够催化甲烷的 C-H 键断裂,并将一个氧原子从 O 插入生成甲醇。只有在所有三种 sMMO 蛋白成分:羟化酶(MMOH)、还原酶(MMOR)和调节蛋白(MMOB)存在的情况下,才会发生高效的多次转化催化。sMMO 蛋白成分相互作用的复杂系列调节 sMMO 反应循环中间产物的形成和衰减,但尚未完全了解。在这里,通过在含有 5-氟吲哚的限定培养基中表达,将 MMOB 中的两个色氨酸残基和 MMOR 中的一个色氨酸残基转化为 5-氟色氨酸(5FW)。此外,通过 K15C 变体与 3-溴-1,1,1-三氟丙酮(BTFA)的反应,对 MMOB 的机械意义重大的 N 端区域进行 F 标记。5FW 和 BTFA 修饰引起的结构扰动最小,允许使用 F NMR 对与 sMMOH 的相互作用进行详细研究。在 5FW-MMOB 和 BTFA-K15C-5FW-MMOB 与 sMMOH 的 275 kDa 复合物中,很容易在 5 μM 标记蛋白浓度下检测到共振。这种方法直接表明,MMOR 和 MMOB 与 sMMOH 竞争性结合,具有相似的 值,与 sMMOH 二铁簇的氧化态无关。这些发现表明了一种新的调节模型,其中 MMOR 和 MMOB 与 sMMOH 的动态平衡允许关键反应性复合物的瞬时形成,不可逆地推动反应循环前进。sMMOH:MMOB 复合物的交换动力学缓慢,建议防止 MMOR 介导的高氧化态反应循环中间物的还原猝灭,然后它才能与甲烷反应。