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变性能力:一种用于选择有机溶剂作为生物催化反应介质的新定量标准。

Denaturation capacity: a new quantitative criterion for selection of organic solvents as reaction media in biocatalysis.

作者信息

Khmelnitsky Y L, Mozhaev V V, Belova A B, Sergeeva M V, Martinek K

机构信息

A. N. Bakh Institute of Biochemistry, Moscow, USSR.

出版信息

Eur J Biochem. 1991 May 23;198(1):31-41. doi: 10.1111/j.1432-1033.1991.tb15983.x.

Abstract

The process of reversible denaturation of several proteins (alpha-chymotrypsin, trypsin, laccase, chymotrypsinogen, cytochrome c and myoglobin) by a broad series of organic solvents of different nature was investigated using both our own and literature data, based on the results of kinetic and spectroscopic measurements. In all systems studied, the denaturation proceeded in a threshold manner, i.e. an abrupt change in catalytic and/or spectroscopic properties of dissolved proteins was observed after a certain threshold concentration of the organic solvent had been reached. To account for the observed features of the denaturation process, a thermodynamic model of the reversible protein denaturation by organic solvents was developed, based on the widely accepted notion that an undisturbed water shell around the protein globule is a prerequisite for the retention of the native state of the protein. The quantitative treatment led to the equation relating the threshold concentration of the organic solvent with its physicochemical characteristics, such as hydrophobicity, solvating ability and molecular geometry. This equation described well the experimental data for all proteins tested. Based on the thermodynamic model of protein denaturation, a novel quantitative parameter characterizing the denaturing strength of organic solvents, called the denaturation capacity (DC), was suggested. Different organic solvents, arranged according to their DC values, form the DC scale of organic solvents which permits theoretical prediction of the threshold concentration of any organic solvent for a given protein. The validity of the DC scale for this kind of prediction was verified for all proteins tested and a large number of organic solvents. The experimental data for a few organic solvents, such as formamide and N-methylformamide, did not comply with equations describing the denaturation model. Such solvents form the group of so-called 'bad' solvents; reasons for the occurrence of 'bad' solvents are not yet clear. The DC scale was further extended to include also highly nonpolar solvents, in order to explain the well-known ability of enzymes to retain catalytic activity and stability in biphasic systems of the type water/water-immiscible organic solvent. It was quantitatively demonstrated that this ability is accounted for by the simple fact that nonpolar solvents are not sufficiently soluble in water to reach the inactivation threshold concentration.

摘要

基于动力学和光谱测量结果,利用我们自己的数据以及文献数据,研究了一系列性质各异的有机溶剂对几种蛋白质(α-胰凝乳蛋白酶、胰蛋白酶、漆酶、胰凝乳蛋白酶原、细胞色素c和肌红蛋白)的可逆变性过程。在所有研究的体系中,变性以阈值方式进行,即在达到有机溶剂的一定阈值浓度后,观察到溶解蛋白质的催化和/或光谱性质发生突然变化。为了解释变性过程中观察到的特征,基于蛋白质球状体周围未受干扰的水壳是维持蛋白质天然状态的先决条件这一广泛接受的观点,建立了有机溶剂可逆蛋白质变性的热力学模型。定量处理得到了将有机溶剂的阈值浓度与其物理化学特性(如疏水性、溶剂化能力和分子几何形状)相关联的方程。该方程很好地描述了所有测试蛋白质的实验数据。基于蛋白质变性的热力学模型,提出了一个表征有机溶剂变性强度的新定量参数,称为变性容量(DC)。根据其DC值排列的不同有机溶剂形成了有机溶剂的DC标度,这允许对给定蛋白质的任何有机溶剂的阈值浓度进行理论预测。对于所有测试蛋白质和大量有机溶剂,验证了DC标度用于这种预测的有效性。少数有机溶剂(如甲酰胺和N-甲基甲酰胺)的实验数据不符合描述变性模型的方程。这类溶剂构成了所谓的“不良”溶剂组;“不良”溶剂出现的原因尚不清楚。DC标度进一步扩展到包括高度非极性溶剂,以解释酶在水/与水不混溶的有机溶剂类型的双相体系中保持催化活性和稳定性的众所周知的能力。定量证明,这种能力是由非极性溶剂在水中的溶解度不足以达到失活阈值浓度这一简单事实所导致的。

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