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IS801,一种从菜豆假单胞菌中分离出的插入序列元件。

IS801, an insertion sequence element isolated from Pseudomonas syringae pathovar phaseolicola.

作者信息

Romantschuk M, Richter G Y, Mukhopadhyay P, Mills D

机构信息

Department of General Microbiology, University of Helsinki, Finland.

出版信息

Mol Microbiol. 1991 Mar;5(3):617-22. doi: 10.1111/j.1365-2958.1991.tb00732.x.

Abstract

A transposable element, designated IS801, was isolated from strain LR781 of Pseudomonas syringae pathovar phaseolicola in two independent events using the entrapment plasmid, pUCD800. IS801 is 1517 base pairs in length and contains open reading frames that potentially encode proteins of 311 and 172 amino acids, as well as smaller proteins. Unlike most other prokaryotic transposable elements, IS801 lacks terminal repeats. Sequence analysis revealed two target pentamers for IS801 insertion that differ by one base pair. One copy of IS801 generated a perfect duplication of its target, TGAAC. The second copy of IS801 was flanked by the target, TGGAC, at one end, and TGAAC at the other end. A third copy of IS801 was cloned from pMMC7105, an indigenous plasmid of strain LR781, and it was flanked by copies of the pentamer TGAAC.

摘要

利用捕获质粒pUCD800,通过两个独立事件从菜豆假单胞菌致病变种LR781菌株中分离出一个转座元件,命名为IS801。IS801长度为1517个碱基对,包含可能编码311和172个氨基酸的蛋白质以及较小蛋白质的开放阅读框。与大多数其他原核转座元件不同,IS801缺乏末端重复序列。序列分析揭示了IS801插入的两个靶五聚体,它们相差一个碱基对。IS801的一个拷贝产生了其靶序列TGAAC的完美重复。IS801的第二个拷贝一端侧翼为靶序列TGGAC,另一端侧翼为TGAAC。IS801的第三个拷贝是从LR781菌株的内源质粒pMMC7105中克隆出来的,其侧翼为五聚体TGAAC的拷贝。

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