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比较基因组学为泌尿紧张素II和生长抑素基因家族之间密切的进化关系提供了证据。

Comparative genomics provides evidence for close evolutionary relationships between the urotensin II and somatostatin gene families.

作者信息

Tostivint Hervé, Joly Lucille, Lihrmann Isabelle, Parmentier Caroline, Lebon Alexis, Morisson Mireille, Calas André, Ekker Marc, Vaudry Hubert

机构信息

Institut National de la Santé et de la Recherche Médicale Unité 413, Laboratory of Cellular and Molecular Neuroendocrinology, European Institute for Peptide Research, University of Rouen, 76821 Mont-Saint-Aignan, France.

出版信息

Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2237-42. doi: 10.1073/pnas.0510700103. Epub 2006 Feb 7.

Abstract

Although urotensin II (UII) and somatostatin 1 (SS1) exhibit some structural similarities, their precursors do not show any appreciable sequence identity and, thus, it is widely accepted that the UII and SS1 genes do not derive from a common ancestral gene. The recent characterization of novel isoforms of these two peptides, namely urotensin II-related peptide (URP) and somatostatin 2 (SS2)/cortistatin (CST), provides new opportunity to revisit the phylogenetic relationships of UII and SS1 using a comparative genomics approach. In the present study, by radiation hybrid mapping and in silico sequence analysis, we have determined the chromosomal localization of the genes encoding UII- and somatostatin-related peptides in several vertebrate species, including human, chicken, and zebrafish. In most of the species investigated, the UII and URP genes are closely linked to the SS2/CST and SS1 genes, respectively. We also found that the UII-SS2/CST locus and the URP/SS1 locus are paralogous. Taken together, these data indicate that the UII and URP genes, on the one hand, and the SS1 and SS2/CST genes, on the other hand, arose through a segmental duplication of two ancestral genes that were already physically linked to each other. Our results also suggest that these two genes arose themselves through a tandem duplication of a single ancestral gene. It thus appears that the genes encoding UII- and somatostatin-related peptides belong to the same superfamily.

摘要

尽管尾加压素II(UII)和生长抑素1(SS1)表现出一些结构上的相似性,但它们的前体并未显示出任何明显的序列一致性,因此,人们普遍认为UII和SS1基因并非源自共同的祖先基因。最近对这两种肽的新型异构体,即尾加压素II相关肽(URP)和生长抑素2(SS2)/可体松(CST)的特性描述,为使用比较基因组学方法重新审视UII和SS1的系统发育关系提供了新机会。在本研究中,通过辐射杂种图谱和电子序列分析,我们确定了编码UII和生长抑素相关肽的基因在包括人类、鸡和斑马鱼在内的几种脊椎动物物种中的染色体定位。在大多数被研究的物种中,UII和URP基因分别与SS2/CST和SS1基因紧密连锁。我们还发现UII-SS2/CST基因座和URP/SS1基因座是旁系同源的。综上所述,这些数据表明,一方面UII和URP基因,另一方面SS1和SS2/CST基因,是通过两个已经物理上相互连锁的祖先基因的片段重复产生的。我们的结果还表明,这两个基因本身是通过单个祖先基因的串联重复产生的。因此,编码UII和生长抑素相关肽的基因似乎属于同一个超家族。

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