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受体-配体强制解离实验中的动态无序

Dynamic disorder in receptor-ligand forced dissociation experiments.

作者信息

Liu Fei, Ou-Yang Zhong-can, Iwamoto Mitsumasa

机构信息

Center for Advanced Study, Tsinghua University, Beijing 100084, China.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Jan;73(1 Pt 1):010901. doi: 10.1103/PhysRevE.73.010901. Epub 2006 Jan 26.

Abstract

Recently experiments showed that some biological noncovalent bonds increase their lifetimes when they are stretched by an external force, and their lifetimes will decrease when the force increases further. Several specific quantitative models have been proposed to explain the intriguing transitions from the "catch bond" to the "slip bond." In this work we propose that the dynamic disorder of the force-dependent dissociation rate can account for the counterintuitive behaviors of the bonds. A Gaussian stochastic rate model is used to quantitatively describe the transitions observed recently in the single bond P-selctin glycoprotein ligand 1-P-selectin force rupture experiment [Marshall, Nature 423, 190 (2003)]. Our model agrees well with the experimental data. We conclude that the catch bonds could arise from the stronger positive correlation between the height of the intrinsic energy barrier and the distance from the bound state to the barrier; classical pathway scenario or a priori catch bond assumption is not essential.

摘要

最近的实验表明,一些生物非共价键在受到外力拉伸时其寿命会延长,而当外力进一步增大时其寿命会缩短。已经提出了几种具体的定量模型来解释从“捕获键”到“滑动键”这种引人入胜的转变。在这项工作中,我们提出力依赖解离速率的动态无序可以解释这些键的反直觉行为。使用高斯随机速率模型来定量描述最近在单键P-选择素糖蛋白配体1-P-选择素力破裂实验中观察到的转变[马歇尔,《自然》423, 190 (2003)]。我们的模型与实验数据吻合得很好。我们得出结论,捕获键可能源于内在能垒高度与从结合态到能垒的距离之间更强的正相关;经典途径情形或先验捕获键假设并非必要。

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