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拟南芥地上部钾浓度自然变异的遗传图谱分析。

Genetic mapping of natural variation in potassium concentrations in shoots of Arabidopsis thaliana.

作者信息

Harada Hisatomi, Leigh Roger A

机构信息

National Institute of Livestock and Grassland Science, 768 Senbonmatsu, Nasushiobara, Tochigh, 329-2793, Japan.

出版信息

J Exp Bot. 2006;57(4):953-60. doi: 10.1093/jxb/erj081. Epub 2006 Feb 17.

Abstract

Naturally-occurring variation in K(+) concentrations between plant genotypes is potentially exploitable in a number of ways, including altering the relationship between K(+) accumulation and growth, enhancing salinity resistance, or improving forage quality. However, achieving these requires greater insight into the genetic basis of the variation in tissue K(+) concentrations. To this end, K(+) concentrations were measured in the shoots of 70 Arabidopsis thaliana accessions and a Cape Verdi Island/Landsberg erecta recombinant inbred line (RIL) population. The shoot K(+) concentrations expressed on the basis of fresh matter (KFM) or dry matter (KDM) were both broadly and normally distributed as was the shoot dry matter content per unit fresh weight (DMC). Using the data from the RILs, four quantitative trait loci (QTL) were identified for KFM and three for KDM. These were located on chromosomes 2, 3, 4, and 5. Two of the QTLs for KFM overlapped with those for KDM. None of these QTLs overlapped with those for fresh weight or dry weight, but the QTL for KDM located on chromosome 3 overlapped with one for DMC. In silico analysis was used to identify known or putative K(+) and cation transporter genes whose loci overlapped with the QTLs. In most cases, multiple genes were identified and the possible role of their gene products in determining shoot K(+) concentrations is discussed.

摘要

植物基因型之间钾离子浓度的自然变异在许多方面都具有潜在的可利用性,包括改变钾离子积累与生长之间的关系、增强耐盐性或改善饲料质量。然而,要实现这些目标,需要更深入地了解组织钾离子浓度变异的遗传基础。为此,对70个拟南芥生态型的地上部分以及一个佛得角群岛/直立型兰茨贝格重组自交系(RIL)群体的钾离子浓度进行了测量。以鲜重(KFM)或干重(KDM)为基础表示的地上部分钾离子浓度以及单位鲜重的地上部分干物质含量(DMC)均呈广泛且正态分布。利用RIL的数据,鉴定出了4个控制KFM的数量性状位点(QTL)和3个控制KDM的QTL。它们位于第2、3、4和5号染色体上。两个控制KFM的QTL与控制KDM的QTL重叠。这些QTL均与控制鲜重或干重的QTL不重叠,但位于第3号染色体上控制KDM的QTL与控制DMC的一个QTL重叠。通过电子分析来鉴定已知的或推测的钾离子及阳离子转运蛋白基因,其基因座与这些QTL重叠。在大多数情况下,鉴定出了多个基因,并讨论了其基因产物在决定地上部分钾离子浓度方面可能的作用。

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