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一种通过耦合超日振荡器产生昼夜节律的模型。

A model for generating circadian rhythm by coupling ultradian oscillators.

作者信息

Paetkau Verner, Edwards Roderick, Illner Reinhard

机构信息

Department of Biochemistry and Microbiology, University of Victoria Victoria, British Columbia, Canada.

出版信息

Theor Biol Med Model. 2006 Feb 23;3:12. doi: 10.1186/1742-4682-3-12.

Abstract

BACKGROUND

Organisms ranging from humans to cyanobacteria undergo circadian rhythm, that is, variations in behavior that cycle over a period about 24 hours in length. A fundamental property of circadian rhythm is that it is free-running, and continues with a period close to 24 hours in the absence of light cycles or other external cues. Regulatory networks involving feedback inhibition and feedforward stimulation of mRNA transcription and translation are thought to be critical for many circadian mechanisms, and genes coding for essential components of circadian rhythm have been identified in several organisms. However, it is not clear how such components are organized to generate a circadian oscillation.

RESULTS

We propose a model in which two independent transcriptional-translational oscillators with periods much shorter than 24 hours are coupled to drive a forced oscillator that has a circadian period, using mechanisms and parameters of conventional molecular biology. Furthermore, the resulting circadian oscillator can be entrained by an external light-dark cycle through known mechanisms. We rationalize the mathematical basis for the observed behavior of the model, and show that the behavior is not dependent on the details of the component ultradian oscillators but occurs even if quite generalized basic oscillators are used.

CONCLUSION

We conclude that coupled, independent, transcriptional-translational oscillators with relatively short periods can be the basis for circadian oscillators. The resulting circadian oscillator can be entrained by 24-hour light-dark cycles, and the model suggests a mechanism for its evolution.

摘要

背景

从人类到蓝藻等生物体都存在昼夜节律,即行为上的变化以大约24小时的周期循环。昼夜节律的一个基本特性是它能够自主运行,在没有光周期或其他外部线索的情况下,仍以接近24小时的周期持续。涉及mRNA转录和翻译的反馈抑制和前馈刺激的调控网络被认为对许多昼夜节律机制至关重要,并且在几种生物体中已经鉴定出编码昼夜节律基本组成部分的基因。然而,尚不清楚这些组成部分是如何组织起来产生昼夜振荡的。

结果

我们提出了一个模型,其中两个周期远短于24小时的独立转录 - 翻译振荡器通过传统分子生物学的机制和参数耦合,以驱动一个具有昼夜周期的强迫振荡器。此外,由此产生的昼夜振荡器可以通过已知机制被外部明暗周期所调节。我们阐述了该模型所观察到行为的数学基础,并表明这种行为并不依赖于组成超日振荡器的细节,即使使用相当通用的基本振荡器也会出现这种行为。

结论

我们得出结论,耦合的、独立的、周期相对较短的转录 - 翻译振荡器可以作为昼夜振荡器的基础。由此产生的昼夜振荡器可以被24小时的明暗周期所调节,并且该模型提出了其进化的一种机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e890/1402262/d61f0c80ae04/1742-4682-3-12-1.jpg

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