Zeng Huazong, Zhong Yang, Luo Lijun
Institute of Biodiversity Science, School of Life Sciences, Fudan University, Shanghai 200433, People's Republic of China.
Funct Integr Genomics. 2006 Oct;6(4):338-41. doi: 10.1007/s10142-006-0021-8. Epub 2006 Mar 22.
Quantitative trait loci (QTLs) for drought tolerance (DT) can be readily identified in available databases and in this paper, these QTLs were summarized in the form of a consensus map. An in silico strategy was then deployed to mine for candidate genes associated with DT QTLs using rice dbEST and rice genome databases. DT QTLs on rice chromosomes 1, 2, 4, 8, and 9 were selected to test the method. The result showed candidate genes associated with DT could be readily identified.
耐旱性(DT)的数量性状位点(QTL)可以在现有数据库中轻松识别,在本文中,这些QTL以共识图谱的形式进行了总结。然后采用电子克隆策略,利用水稻dbEST和水稻基因组数据库挖掘与DT QTL相关的候选基因。选择水稻第1、2、4、8和9号染色体上的DT QTL来测试该方法。结果表明,可以轻松识别与DT相关的候选基因。