Cho Jang-Cheon, Giovannoni Stephen J
Division of Life and Marine Sciences, Inha University, Incheon 402-751, Republic of Korea.
Department of Microbiology, Oregon State University, Corvallis, OR 97331, USA.
Int J Syst Evol Microbiol. 2006 Apr;56(Pt 4):855-859. doi: 10.1099/ijs.0.64063-0.
A Gram-negative, chemoheterotrophic, facultatively anaerobic, slightly halophilic, oval-shaped marine bacterium, designated HTCC2601T, was isolated from the western Sargasso Sea by high-throughput culturing involving dilution to extinction. Although the 16S rRNA gene sequence similarity between the isolate and Salipiger mucosus was 96.5 %, phylogenetic analyses using different treeing algorithms clearly indicated that the strain forms a distinct lineage within a clade containing the recently classified genera Salipiger and Palleronia in the order Rhodobacterales of the Alphaproteobacteria. The DNA-DNA relatedness between strain HTCC2601T and S. mucosus was 26.3 %. Strain HTCC2601T utilized a wide range of carbohydrates, including hexose monomers, sugar alcohols, organic acids and amino acids, as sole carbon sources. The DNA G+C content of strain HTCC2601T was 65.4 mol%, and the predominant constituents of the cellular fatty acids were 18 : 1omega7c (79.7 %) and 11-methyl 18 : 1omega7c (7.5 %). The strain differed from members of the closely related genera Salipiger and Palleronia in its morphological, biochemical and ecological characteristics. On the basis of the taxonomic data obtained in this study, a novel genus and species, Pelagibaca bermudensis gen. nov., sp. nov., is proposed; HTCC2601T (=KCTC 12554T = JCM 13377T) is the type strain of Pelagibaca bermudensis.
一株革兰氏阴性、化能异养、兼性厌氧、轻度嗜盐、椭圆形的海洋细菌,命名为HTCC2601T,通过稀释至灭绝的高通量培养方法从马尾藻海西部分离得到。尽管该分离株与黏液盐栖菌(Salipiger mucosus)的16S rRNA基因序列相似性为96.5%,但使用不同建树算法进行的系统发育分析清楚地表明,该菌株在包含最近分类的盐栖菌属(Salipiger)和帕勒罗尼亚菌属(Palleronia)的一个进化枝内形成了一个独特的谱系,这两个属属于α-变形菌纲红杆菌目(Rhodobacterales)。菌株HTCC2601T与黏液盐栖菌的DNA-DNA相关性为26.3%。菌株HTCC2601T能够利用多种碳水化合物,包括己糖单体、糖醇、有机酸和氨基酸作为唯一碳源。菌株HTCC2601T的DNA G+C含量为65.4 mol%,细胞脂肪酸的主要成分是18 : 1ω7c(79.7%)和11-甲基18 : 1ω7c(7.5%)。该菌株在形态、生化和生态特征方面与密切相关的盐栖菌属和帕勒罗尼亚菌属的成员不同。基于本研究获得的分类学数据,提出了一个新属和新种,即百慕大远洋杆菌(Pelagibaca bermudensis) gen. nov., sp. nov.;HTCC2601T(=KCTC 12554T = JCM 13377T)是百慕大远洋杆菌的模式菌株。