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布氏锥虫细胞色素氧化酶亚基III RNA负链互补序列的鉴定

Identification of negative-strand complements to cytochrome oxidase subunit III RNA in Trypanosoma brucei.

作者信息

Volloch V, Schweitzer B, Zhang X, Rits S

机构信息

Boston Biomedical Research Institute, MA 02114.

出版信息

Proc Natl Acad Sci U S A. 1991 Dec 1;88(23):10671-5. doi: 10.1073/pnas.88.23.10671.

DOI:10.1073/pnas.88.23.10671
PMID:1660145
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC52992/
Abstract

A substantial amount of cytochrome oxidase subunit III (COIII) mRNA continues to be synthesized de novo in Trypanosoma brucei in the presence of actinomycin D, presumably by a DNA-independent transcription process. We describe the identification of negative-strand COIII RNA molecules, characterization of their termini, and the detection of RNA-dependent RNA polymerase activity. Three lines of evidence for the existence of negative-strand COIII RNA are presented: (i) hybridization with oligonucleotide probes with the same polarity as mRNA after preliminary enrichment for putative negative-strand RNA by affinity purification; (ii) cloning and sequencing of negative-strand complements for the unedited, edited, and partially edited COIII RNA; and (iii) exact correspondence of the terminal sequences of the putative negative-strand RNA molecules to the ends of COIII RNA. The presence of negative-strand complements of COIII RNA is consistent with the notion that a significant amount of mRNA in T. brucei is synthesized by an RNA-dependent RNA polymerase with negative-strand RNA as an intermediate template.

摘要

在放线菌素D存在的情况下,布氏锥虫中仍有大量细胞色素氧化酶亚基III(COIII)mRNA持续从头合成,推测这是通过一种不依赖DNA的转录过程实现的。我们描述了负链COIII RNA分子的鉴定、其末端的特征以及RNA依赖性RNA聚合酶活性的检测。提出了三条支持负链COIII RNA存在的证据:(i)在通过亲和纯化初步富集假定的负链RNA后,与极性与mRNA相同的寡核苷酸探针杂交;(ii)对未编辑、已编辑和部分编辑的COIII RNA的负链互补序列进行克隆和测序;(iii)假定的负链RNA分子的末端序列与COIII RNA的末端精确对应。COIII RNA负链互补序列的存在与以下观点一致,即布氏锥虫中的大量mRNA是由以负链RNA为中间模板的RNA依赖性RNA聚合酶合成的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3695/52992/7ba796611daf/pnas01073-0307-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3695/52992/90864569f811/pnas01073-0307-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3695/52992/7ba796611daf/pnas01073-0307-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3695/52992/90864569f811/pnas01073-0307-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3695/52992/7ba796611daf/pnas01073-0307-b.jpg

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本文引用的文献

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Discontinuous transcription and antigenic variation in trypanosomes.锥虫中的间断转录与抗原变异
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Characterization of cytochrome c oxidase III transcripts that are edited only in the 3' region.仅在3'区域发生编辑的细胞色素c氧化酶III转录本的特征分析。
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Trypanosoma brucei minicircles encode multiple guide RNAs which can direct editing of extensively overlapping sequences.布氏锥虫微小环编码多个向导RNA,这些向导RNA可指导对广泛重叠序列的编辑。
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RNA editing in mitochondrial mRNA of trypanosomatids.
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Guide RNAs in kinetoplastid mitochondria have a nonencoded 3' oligo(U) tail involved in recognition of the preedited region.
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