Shinozuka H, Hisano H, Yoneyama S, Shimamoto Y, Jones E S, Forster J W, Yamada T, Kanazawa A
Graduate School of Agriculture, Hokkaido University, 060-8589 Sapporo, Japan.
Mol Genet Genomics. 2006 Apr;275(4):399-408. doi: 10.1007/s00438-005-0095-3. Epub 2006 Jan 28.
A perennial ryegrass cDNA clone encoding a putative glycine-rich RNA binding protein (LpGRP1) was isolated from a cDNA library constructed from crown tissues of cold-treated plants. The deduced polypeptide sequence consists of 107 amino acids with a single N-terminal RNA recognition motif (RRM) and a single C-terminal glycine-rich domain. The sequence showed extensive homology to glycine-rich RNA binding proteins previously identified in other plant species. LpGRP1-specific genomic DNA sequence was isolated by an inverse PCR amplification. A single intron which shows conserved locations in plant genes was detected between the sequence motifs encoding RNP-1 and RNP-2 consensus protein domains. A significant increase in the mRNA level of LpGRP1 was detected in root, crown and leaf tissues during the treatment of plants at 4 degrees C, through which freezing tolerance is attained. The increase in the mRNA level was prominent at least 2 h after the commencement of the cold treatment, and persisted for at least 1 week. Changes in mRNA level induced by cold treatment were more obvious than those due to treatments with abscisic acid (ABA) and drought. The LpGRP1 protein was found to localise in the nucleus in onion epidermal cells, suggesting that it may be involved in pre-mRNA processing. The LpGRP1 gene locus was mapped to linkage group 2. Possible roles for the LpGRP1 protein in adaptation to cold environments are discussed.
从经冷处理植株的冠部组织构建的cDNA文库中分离出一个多年生黑麦草cDNA克隆,其编码一种假定的富含甘氨酸的RNA结合蛋白(LpGRP1)。推导的多肽序列由107个氨基酸组成,具有一个N端RNA识别基序(RRM)和一个C端富含甘氨酸结构域。该序列与先前在其他植物物种中鉴定的富含甘氨酸的RNA结合蛋白具有广泛的同源性。通过反向PCR扩增分离出LpGRP1特异性基因组DNA序列。在编码RNP-1和RNP-2共有蛋白结构域的序列基序之间检测到一个在植物基因中位置保守的单一内含子。在4℃处理植物期间,在根、冠和叶组织中检测到LpGRP1的mRNA水平显著增加,通过该处理可获得抗冻性。mRNA水平的增加在冷处理开始后至少2小时显著,并持续至少1周。冷处理诱导的mRNA水平变化比脱落酸(ABA)和干旱处理引起的变化更明显。发现LpGRP1蛋白定位于洋葱表皮细胞的细胞核中,表明它可能参与前体mRNA加工。LpGRP1基因座被定位到连锁群2。讨论了LpGRP1蛋白在适应寒冷环境中的可能作用。