Early events in protein folding explored by rapid mixing methods.
作者信息
Roder Heinrich, Maki Kosuke, Cheng Hong
机构信息
Basic Science Division, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, Pennsylvania 19111, USA.
出版信息
Chem Rev. 2006 May;106(5):1836-61. doi: 10.1021/cr040430y.
Abstract
摘要
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Quenching interactions and nonexponential decay: tryptophan 138 of bacteriophage T4 lysozyme.猝灭相互作用和非指数衰减：噬菌体 T4 溶菌酶色氨酸 138。
J Fluoresc. 1994 Sep;4(3):203-7. doi: 10.1007/BF01878452.
2
Rapid Mixing and Sampling Techniques.快速混合与采样技术
Science. 1964 Dec 25;146(3652):1697-9. doi: 10.1126/science.146.3652.1697.
3
Specifically collapsed intermediate in the early stage of the folding of ribonuclease A.核糖核酸酶A折叠早期阶段特有的折叠中间体。
J Mol Biol. 2005 Jul 8;350(2):349-62. doi: 10.1016/j.jmb.2005.04.074.
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How well can simulation predict protein folding kinetics and thermodynamics?模拟在预测蛋白质折叠动力学和热力学方面的能力如何？
Annu Rev Biophys Biomol Struct. 2005;34:43-69. doi: 10.1146/annurev.biophys.34.040204.144447.
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Enhanced picture of protein-folding intermediates using organic solvents in H/D exchange and quench-flow experiments.在氢/氘交换和淬灭流动实验中使用有机溶剂增强蛋白质折叠中间体的图像。
Proc Natl Acad Sci U S A. 2005 Mar 29;102(13):4765-70. doi: 10.1073/pnas.0409538102. Epub 2005 Mar 15.
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Specific collapse followed by slow hydrogen-bond formation of beta-sheet in the folding of single-chain monellin.在单链莫内林折叠过程中，先发生特定折叠，随后β-折叠缓慢形成氢键。
Proc Natl Acad Sci U S A. 2005 Feb 22;102(8):2748-53. doi: 10.1073/pnas.0407982102. Epub 2005 Feb 14.
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Structures of p53 cancer mutants and mechanism of rescue by second-site suppressor mutations.p53癌症突变体的结构及第二位点抑制突变的拯救机制。
J Biol Chem. 2005 Apr 22;280(16):16030-7. doi: 10.1074/jbc.M500179200. Epub 2005 Feb 9.
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Kinetics are probe-dependent during downhill folding of an engineered lambda6-85 protein.在一种工程化的λ6-85蛋白的下坡折叠过程中，动力学取决于探针。
Proc Natl Acad Sci U S A. 2005 Feb 15;102(7):2283-7. doi: 10.1073/pnas.0409270102. Epub 2005 Feb 7.
9
Effects of heme on the structure of the denatured state and folding kinetics of cytochrome b562.血红素对细胞色素b562变性态结构及折叠动力学的影响。
J Mol Biol. 2005 Feb 11;346(1):331-44. doi: 10.1016/j.jmb.2004.11.044. Epub 2004 Dec 21.
10
Ultrarapid mixing experiments shed new light on the characteristics of the initial conformational ensemble during the folding of ribonuclease A.超快速混合实验为核糖核酸酶A折叠过程中初始构象集合的特征提供了新的线索。
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