Finegold Sydney M, Lawson Paul A, Vaisanen Marja-Liisa, Molitoris Denise R, Song Yuli, Liu Chengxu, Collins Matthew D
Infectious Diseases Section (111F), VA Medical Center, 11301 Wilshire Boulervard, West Los Angeles, CA, USA.
Anaerobe. 2004 Feb;10(1):41-5. doi: 10.1016/j.anaerobe.2003.10.002.
Phenotypic and phylogenetic studies were performed on an unidentified Gram-positive, strictly anaerobic, non-spore-forming, rod-shaped bacterium isolated from human feces. The organism was catalase-negative, resistant to 20% bile, produced acetic and butyric acids as end products of glucose metabolism, and possessed a G+C content of approximately 70 mol%. Comparative 16S rRNA gene sequencing demonstrated that the unidentified bacterium was a member of the Clostridium sub-phylum of the Gram-positive bacteria, and formed a loose association with rRNA cluster XV. Sequence divergence values of 12% or greater were observed between the unidentified bacterium and all other recognized species within this and related rRNA clusters. Treeing analysis showed the unknown anaerobe formed a deep line branching near to the base of rRNA cluster XV and phylogenetically represents a hitherto unknown taxon, distinct from Acetobacterium, Eubacterium sensu stricto, Pseudoramibacter and other related organisms. Based on both phylogenetic and phenotypic evidence, it is proposed that the unknown bacterium from feces be classified in a new genus Anaerofustis, as Anaerofustis stercorihominis sp. nov. The type strain of Anaerofustis stercorihominis is ATCC BAA-858(T)=CCUG 47767(T).
对从人类粪便中分离出的一株未鉴定的革兰氏阳性、严格厌氧、无芽孢、杆状细菌进行了表型和系统发育研究。该菌过氧化氢酶阴性,对20%胆汁有抗性,葡萄糖代谢的终产物为乙酸和丁酸,G+C含量约为70mol%。比较16S rRNA基因测序表明,该未鉴定细菌是革兰氏阳性菌梭菌亚门的成员,与rRNA簇XV形成松散的关联。在该rRNA簇及相关rRNA簇中,该未鉴定细菌与所有其他已确认的物种之间的序列差异值均在12%或更高。系统发育分析表明,该未知厌氧菌在rRNA簇XV基部附近形成一个深分支,在系统发育上代表一个迄今未知的分类单元,与醋杆菌属、真杆菌属、假拉米杆菌属及其他相关生物不同。基于系统发育和表型证据,建议将该来自粪便的未知细菌归入一个新属——厌氧粪杆菌属,命名为粪栖厌氧粪杆菌新种。粪栖厌氧粪杆菌的模式菌株为ATCC BAA-858(T)=CCUG 47767(T)。