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来自嗜盐栖冷假交替单胞菌的嗜冷超氧化物歧化酶:生化特性及一个高反应性半胱氨酸残基的鉴定

Psychrophilic superoxide dismutase from Pseudoalteromonas haloplanktis: biochemical characterization and identification of a highly reactive cysteine residue.

作者信息

Castellano I, Di Maro A, Ruocco M R, Chambery A, Parente A, Di Martino M T, Parlato G, Masullo M, De Vendittis E

机构信息

Dipartimento di Biochimica e Biotecnologie Mediche, Università di Napoli Federico II, Via S. Pansini 5, 80131 Napoli, Italy.

出版信息

Biochimie. 2006 Oct;88(10):1377-89. doi: 10.1016/j.biochi.2006.04.005. Epub 2006 Apr 27.

DOI:10.1016/j.biochi.2006.04.005
PMID:16713057
Abstract

A psychrophilic superoxide dismutase (SOD) has been characterized from the Antarctic eubacterium Pseudoalteromonas haloplanktis (Ph). PhSOD is a homodimeric iron-containing enzyme and displays a high specific activity, even at low temperature. The enzyme is inhibited by sodium azide and inactivated by hydrogen peroxide; it is also very sensitive to peroxynitrite, a physiological inactivator of the human mitochondrial Mn-SOD. Even though PhSOD is isolated from a cold-adapted micro-organism, its heat stability is well above the maximum growth temperature of P. haloplanktis, a feature common to other Fe- and Mn-SODs. The primary structure of PhSOD was determined by a combination of mass spectrometry and automated Edman degradation. The polypeptide chain is made of 192 amino acid residues, corresponding to a molecular mass of 21251 Da. The alignment with other Fe- and Mn-SODs showed a high amino acid identity with Fe-SOD from Vibrio cholerae (79%) and Escherichia coli (70%). A significant similarity is also shared with human mitochondrial Mn-SOD. PhSOD has the unique and highly reactive Cys57 residue, located in a variable region of the protein. The three-dimensional model of the PhSOD monomer indicates that Cys57 is included in a region, whose structural organization apparently discriminates between dimeric and tetrameric SODs. This residue forms a disulfide adduct with beta-mercaptoethanol, when this reducing agent is added in the purification procedure. The reactivity of Cys57 leads also to the formation of a disulfide bridge between two PhSOD subunits in specific denaturing conditions. The possible modification of Cys57 by physiological thiols, eventually regulating the PhSOD functioning, is discussed.

摘要

从南极真细菌嗜冷栖假交替单胞菌(Ph)中鉴定出一种嗜冷超氧化物歧化酶(SOD)。PhSOD是一种同型二聚体含铁酶,即使在低温下也具有很高的比活性。该酶受叠氮化钠抑制,被过氧化氢灭活;它对过氧亚硝酸盐也非常敏感,过氧亚硝酸盐是人类线粒体锰超氧化物歧化酶的一种生理性失活剂。尽管PhSOD是从一种适应低温的微生物中分离出来的,但其热稳定性远高于嗜冷栖假交替单胞菌的最高生长温度,这是其他铁和锰超氧化物歧化酶共有的特征。通过质谱分析和自动Edman降解相结合的方法确定了PhSOD的一级结构。多肽链由192个氨基酸残基组成,分子量为21251 Da。与其他铁和锰超氧化物歧化酶的比对显示,与霍乱弧菌的铁超氧化物歧化酶(79%)和大肠杆菌的铁超氧化物歧化酶(70%)具有高度的氨基酸同一性。与人类线粒体锰超氧化物歧化酶也有显著的相似性。PhSOD具有独特且高度反应性的Cys57残基,位于蛋白质的可变区域。PhSOD单体的三维模型表明,Cys57包含在一个区域内,该区域的结构组织明显区分二聚体和四聚体超氧化物歧化酶。当在纯化过程中加入这种还原剂时,该残基会与β-巯基乙醇形成二硫键加合物。Cys57的反应性还导致在特定变性条件下两个PhSOD亚基之间形成二硫键。讨论了生理硫醇对Cys57的可能修饰,最终调节PhSOD的功能。

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