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来自嗜冷微生物的一些关于酶的线索。

Some Clues about Enzymes from Psychrophilic Microorganisms.

作者信息

Rapuano Roberta, Graziano Giuseppe

机构信息

Dipartimento di Scienze e Tecnologie, Università del Sannio, Via Francesco de Sanctis snc, 82100 Benevento, Italy.

出版信息

Microorganisms. 2022 Jun 6;10(6):1161. doi: 10.3390/microorganisms10061161.

DOI:10.3390/microorganisms10061161
PMID:35744679
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9227589/
Abstract

Enzymes purified from psychrophilic microorganisms prove to be efficient catalysts at low temperatures and possess a great potential for biotechnological applications. The low-temperature catalytic activity has to come from specific structural fluctuations involving the active site region, however, the relationship between protein conformational stability and enzymatic activity is subtle. We provide a survey of the thermodynamic stability of globular proteins and their rationalization grounded in a theoretical approach devised by one of us. Furthermore, we provide a link between marginal conformational stability and protein flexibility grounded in the harmonic approximation of the vibrational degrees of freedom, emphasizing the occurrence of long-wavelength and excited vibrations in all globular proteins. Finally, we offer a close view of three enzymes: chloride-dependent α-amylase, citrate synthase, and β-galactosidase.

摘要

从嗜冷微生物中纯化得到的酶在低温下是高效催化剂,具有巨大的生物技术应用潜力。然而,低温催化活性必须源于涉及活性位点区域的特定结构波动,蛋白质构象稳定性与酶活性之间的关系很微妙。我们综述了球状蛋白质的热力学稳定性,并基于我们其中一人设计的理论方法对其进行了合理化解释。此外,我们基于振动自由度的简谐近似,建立了边缘构象稳定性与蛋白质灵活性之间的联系,强调了所有球状蛋白质中长波长和激发振动的存在。最后,我们详细介绍了三种酶:氯离子依赖性α-淀粉酶、柠檬酸合酶和β-半乳糖苷酶。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/4c433f934e45/microorganisms-10-01161-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/07b58a9bfc9a/microorganisms-10-01161-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/9c119075b1e8/microorganisms-10-01161-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/50bd6183ca8e/microorganisms-10-01161-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/d1f66b580336/microorganisms-10-01161-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/0cd41bc5913a/microorganisms-10-01161-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/0638f8399886/microorganisms-10-01161-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/4c433f934e45/microorganisms-10-01161-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/07b58a9bfc9a/microorganisms-10-01161-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/9c119075b1e8/microorganisms-10-01161-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/50bd6183ca8e/microorganisms-10-01161-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/d1f66b580336/microorganisms-10-01161-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/0cd41bc5913a/microorganisms-10-01161-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/0638f8399886/microorganisms-10-01161-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95db/9227589/4c433f934e45/microorganisms-10-01161-g007.jpg

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本文引用的文献

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2
Psychrophilic Bacterial Phosphate-Biofertilizers: A Novel Extremophile for Sustainable Crop Production under Cold Environment.嗜冷细菌磷肥:一种用于寒冷环境下可持续作物生产的新型嗜极生物。
Microorganisms. 2021 Nov 28;9(12):2451. doi: 10.3390/microorganisms9122451.
3
Extremophile enzyme optimization for low temperature and high salinity are fundamentally incompatible.
Front Microbiol. 2023 Jul 17;14:1218708. doi: 10.3389/fmicb.2023.1218708. eCollection 2023.
极端酶的低温和高盐优化从根本上是不相容的。
Extremophiles. 2021 Dec 23;26(1):5. doi: 10.1007/s00792-021-01254-9.
4
Temperature effect on polymerase fidelity.温度对聚合酶保真度的影响。
J Biol Chem. 2021 Nov;297(5):101270. doi: 10.1016/j.jbc.2021.101270. Epub 2021 Oct 23.
5
Biochemical and structural studies of two tetrameric nucleoside 2'-deoxyribosyltransferases from psychrophilic and mesophilic bacteria: Insights into cold-adaptation.嗜冷和中温细菌两种四聚体核苷 2′-脱氧核糖基转移酶的生化和结构研究:对冷适应的深入了解。
Int J Biol Macromol. 2021 Dec 1;192:138-150. doi: 10.1016/j.ijbiomac.2021.09.164. Epub 2021 Oct 5.
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Industrial applications of cold-adapted enzymes: challenges, innovations and future perspective.冷适应酶的工业应用:挑战、创新与未来展望。
3 Biotech. 2021 Oct;11(10):426. doi: 10.1007/s13205-021-02929-y. Epub 2021 Sep 6.
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Psychrophiles: A journey of hope.嗜冷菌:希望之旅。
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