Osman Shariff, Satomi Masataka, Venkateswaran Kasthuri
Biotechnology and Planetary Protection Group, Jet Propulsion Laboratory, California Institute of Technology, 89-2; Biotechnology and Planetary Protection Group, 4800, Oak Grove Dr., Pasadena, CA 91109, USA.
National Research Institute of Fisheries Science, Fisheries Research Agency, Yokohama, 236-8648, Japan.
Int J Syst Evol Microbiol. 2006 Jul;56(Pt 7):1509-1514. doi: 10.1099/ijs.0.64085-0.
Two novel spore-forming, Gram-positive, mesophilic, heterotrophic bacteria representing two novel species were isolated from the Jet Propulsion Laboratory Spacecraft Assembly Facility (JPL-SAF) at Pasadena, CA, USA. The incidence of similar strains was examined by screening the growing collection of isolates ( approximately 400 strains) obtained from the JPL-SAF using species-specific PCR primer sets designed from the 16S rRNA gene sequences of strains SAFN-016(T) and SAFN-007(T). Phylogenetic analysis of 16S rRNA gene sequences placed these novel isolates within the genus Paenibacillus. Two strains, SAFN-016(T) and SAFN-125, shared 98 % 16S rRNA gene sequence similarity with Paenibacillus timonensis and 97 % similarity with Paenibacillus macerans. Strain SAFN-007(T) showed 95.2 % 16S rRNA gene sequence similarity with Paenibacillus kobensis, its nearest phylogenetic neighbour. The results of DNA-DNA hybridization, physiological tests and biochemical analysis allowed genotypic and phenotypic differentiation of the isolates from currently recognized Paenibacillus species. Strain SAFN-007(T) and strains SAFN-016(T) and SAFN-125 are representatives of two separate novel species, for which the names Paenibacillus pasadenensis sp. nov. (type strain SAFN-007(T)=ATCC BAA-1211(T)=NBRC 101214(T)) and Paenibacillus barengoltzii sp. nov. (type strain SAFN-016(T)=ATCC BAA-1209(T)=NBRC 101215(T)) are proposed.
从美国加利福尼亚州帕萨迪纳市的喷气推进实验室航天器装配设施(JPL - SAF)中分离出了两种形成芽孢、革兰氏阳性、嗜温、异养的新型细菌,它们代表了两个新物种。通过使用根据菌株SAFN - 016(T)和SAFN - 007(T)的16S rRNA基因序列设计的种特异性PCR引物对,对从JPL - SAF获得的不断增加的分离株集合(约400株)进行筛选,检查了相似菌株的发生率。对16S rRNA基因序列的系统发育分析将这些新分离株置于芽孢杆菌属内。两株菌株SAFN - 016(T)和SAFN - 125与蒂莫内斯芽孢杆菌的16S rRNA基因序列相似性为98%,与浸麻芽孢杆菌的相似性为97%。菌株SAFN - 007(T)与其最近的系统发育邻居科本斯芽孢杆菌的16S rRNA基因序列相似性为95.2%。DNA - DNA杂交、生理测试和生化分析的结果使得这些分离株能够与目前已认可的芽孢杆菌属物种在基因型和表型上进行区分。菌株SAFN - 007(T)以及菌株SAFN - 016(T)和SAFN - 125是两个不同新物种的代表,为此提出了新名称帕萨迪纳芽孢杆菌(Paenibacillus pasadenensis sp. nov.)(模式菌株SAFN - 007(T)=ATCC BAA - 1211(T)=NBRC 101214(T))和巴伦戈尔茨芽孢杆菌(Paenibacillus barengoltzii sp nov.)(模式菌株SAFN - 016(T)=ATCC BAA - 1209(T)=NBRC 101215(T))。