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通过共价连接的组氨酸 - 酪氨酸的电子/质子转移形成酪氨酸自由基的结构特征和能量学:细胞色素C氧化酶的模型

Structural character and energetics of tyrosyl radical formation by electron/proton transfers of a covalently linked histidine-tyrosine: a model for cytochrome C oxidase.

作者信息

Bu Yuxiang, Cukier R I

机构信息

Department of Chemistry, Michigan State University, East Lansing, Michigan 48824-1322, USA.

出版信息

J Phys Chem B. 2005 Nov 24;109(46):22013-26. doi: 10.1021/jp053046t.

Abstract

The structural, energetic, and electronic and IR spectroscopic properties for a model of the cross-linked histidine-tyrosine (His-Tyr) residues as found in cytochrome c oxidase (CcO) are investigated by ab initio methods. The formation of a His-Tyr radical is studied by two paths: proton release followed by electron release and vice versa. The energetics for the proton/electron releases of the Tyr depend modestly on the cross-linked His substituent and, more sensitively, on the charge of the cation attached to the imino N site of the His residue. Protonation of the imino N site significantly increases the electron ionization potential and decreases the proton dissociation energy, making them competitive processes. A positive charge placed at the imino N site, whose value is scanned from zero to one, shows a continuous increase in ionization potential and a decrease in proton dissociation energy, with the +1 limit agreeing well with the protonated imino N site result, indicating a dominant electrostatic effect. The charge populations and the spin density distributions of the His-Tyr model, the radical cation formed by electron ionization, the anion formed by proton dissociation, and the final His-Tyr radical depend sensitively on the substituents, implying a modulation role on the charge transfer between the phenol and imidazole rings, especially for the charged species. His-Tyr and protonated His-Tyr exhibit differences among their respective structural isomers with consequences on their IR absorptions. Small barriers between their pseudo-cis and pseudo-trans rotamers demonstrate the relative flexibility between the two rings, and these may facilitate proton release and charge transfer. The cation effect demonstrates that the cationized cross-linked His-Tyr should be the best candidate to mimic the covalently ring-linked histidine-tyrosine structure in CcO.

摘要

采用从头算方法研究了细胞色素c氧化酶(CcO)中交联组氨酸 - 酪氨酸(His - Tyr)残基模型的结构、能量、电子和红外光谱性质。通过两条途径研究了His - Tyr自由基的形成:质子释放后电子释放,反之亦然。酪氨酸质子/电子释放的能量学适度依赖于交联的组氨酸取代基,更敏感地依赖于连接到组氨酸残基亚氨基N位点的阳离子电荷。亚氨基N位点的质子化显著增加了电子电离势并降低了质子解离能,使它们成为竞争过程。置于亚氨基N位点的正电荷,其值从零扫描到一,显示出电离势的持续增加和质子解离能的降低, +1极限与质子化亚氨基N位点的结果吻合良好,表明存在主要的静电效应。His - Tyr模型、电子电离形成的自由基阳离子、质子解离形成的阴离子以及最终的His - Tyr自由基的电荷分布和自旋密度分布敏感地依赖于取代基,这意味着对酚环和咪唑环之间的电荷转移有调节作用,特别是对于带电物种。His - Tyr和质子化His - Tyr在各自的结构异构体之间表现出差异,这对它们的红外吸收有影响。它们的假顺式和假反式旋转异构体之间的小势垒表明两个环之间具有相对灵活性,这可能有助于质子释放和电荷转移。阳离子效应表明阳离子化的交联His - Tyr应该是模拟CcO中共价键连接的组氨酸 - 酪氨酸结构的最佳候选者。

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