Gandhe Archana S, Arunkumar K P, John Serene H, Nagaraju J
Laboratory of Molecular Genetics, Centre for DNA Fingerprinting and Diagnostics, ECIL Road, Nacharam, Hyderabad 500076, India.
BMC Genomics. 2006 Jul 21;7:184. doi: 10.1186/1471-2164-7-184.
In the recent years a strong resemblance has been observed between the insect immune system and the mammalian innate immune mechanisms suggesting their common origin. Among the insects, only the dipterans (Drosophila and various mosquito species) have been widely investigated for their immune responses towards diverse pathogens. In the present study we constructed and analysed the immune transcriptome of the lepidopteran Antheraea mylitta, an economically important Indian tasar silkmoth with a view to unravel the potential immune-related genes and pathways.
An expressed sequence tag (EST) library was constructed from mRNA obtained from fat bodies of A. mylitta larvae that had been challenged by infection with Escherichia coli cells. We identified 719 unique ESTs from a total of 1412 sequences so generated. A third of the transcriptome showed similarity with previously characterized immune-related genes that included both the known and putative immune genes. Of the four putative novel defence proteins (DFPs) annotated by PSI-BLAST three showed similarity to extracellular matrix proteins from vertebrates implicated in innate immunity, while the fourth was similar to, yet distinct from, the anti-microbial protein cecropin. Finally, we analysed the expression profiles of 15 potential immune-related genes, and the majority of them were induced more prominently with E. coli compared to Micrococcus luteus. We also identified several unknown proteins, some of which could have probable immune-related functions based on the results of the ProDom analysis.
The present study has identified many potential immune-related genes in A. mylitta some of which are vertebrate homologues and others are hitherto unreported putative defence proteins. Several genes were present as members of gene families, as has also been observed in other insect species.
近年来,人们观察到昆虫免疫系统与哺乳动物先天免疫机制之间存在强烈的相似性,这表明它们有共同的起源。在昆虫中,只有双翅目昆虫(果蝇和各种蚊子)因其对多种病原体的免疫反应而受到广泛研究。在本研究中,我们构建并分析了印度经济上重要的野蚕——柞蚕的免疫转录组,以揭示潜在的免疫相关基因和途径。
从受大肠杆菌细胞感染的柞蚕幼虫脂肪体获得的mRNA构建了一个表达序列标签(EST)文库。我们从总共1412个这样产生的序列中鉴定出719个独特的EST。转录组的三分之一与先前表征的免疫相关基因显示出相似性,这些基因包括已知的和推定的免疫基因。在通过PSI-BLAST注释的四种推定的新型防御蛋白(DFP)中,三种与脊椎动物中涉及先天免疫的细胞外基质蛋白相似,而第四种与抗菌蛋白天蚕素相似但又不同。最后,我们分析了15个潜在免疫相关基因的表达谱,与藤黄微球菌相比,它们中的大多数在大肠杆菌感染时诱导更为显著。我们还鉴定了几种未知蛋白质,根据ProDom分析结果,其中一些可能具有潜在的免疫相关功能。
本研究在柞蚕中鉴定出许多潜在的免疫相关基因,其中一些是脊椎动物的同源物,其他是迄今未报道的推定防御蛋白。一些基因作为基因家族的成员存在,这在其他昆虫物种中也有观察到。