Orr H Allen
Department of Biology, University of Rochester, Rochester, New York 14627, USA.
Evolution. 2006 Jun;60(6):1113-24.
Several recent theoretical studies of the genetics of adaptation have focused on the mutational landscape model, which considers evolution on rugged fitness landscapes (i.e., ones having many local optima). Adaptation in this model is characterized by several simple results. Here I ask whether these results also hold on correlated fitness landscapes, which are smoother than those considered in the mutational landscape model. In particular, I study the genetics of adaptation in the block model, a tunably rugged model of fitness landscapes. Considering the scenario in which adaptation begins from a high fitness wild-type DNA sequence, I use extreme value theory and computer simulations to study both single adaptive steps and entire adaptive walks. I show that all previous results characterizing single steps in adaptation in the mutational landscape model hold at least approximately on correlated landscapes in the block model; many entire-walk results, however, do not.
最近有几项关于适应性遗传学的理论研究聚焦于突变景观模型,该模型考虑的是在崎岖适应度景观(即具有许多局部最优的景观)上的进化。此模型中的适应性具有几个简单的结果。在此我要问,这些结果在相关性适应度景观上是否也成立,相关性适应度景观比突变景观模型中所考虑的景观更为平滑。特别是,我研究了块模型中适应性的遗传学,这是一种适应度景观的可调崎岖模型。考虑到从高适应度野生型DNA序列开始适应的情景,我使用极值理论和计算机模拟来研究单个适应步骤和整个适应过程。我表明,先前所有描述突变景观模型中单个适应步骤的结果,至少在块模型的相关性景观上大致成立;然而,许多关于整个适应过程的结果并不成立。