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[真核生物中终止密码子处的非规范解码事件]

[Non-canonical decoding events at stop codons in eukaryotes].

作者信息

Doronina Victoria A, Brown Jeremy D

出版信息

Mol Biol (Mosk). 2006 Jul-Aug;40(4):731-41.

PMID:16913232
Abstract

Regulation of protein synthesis at translation termination is a relatively under-explored, but rapidly expanding field. Recent advances in elucidating the mechanism of translation termination are helping to understand non-canonical events associated with translation termination. These "recoding" events include read-through of stop-codons, insertion of unusual amino acids such as selenocysteine and production of several polypeptides from one open reading frame. This review summarises data on termination-dependent recoding events, and proposes that there are two types of stop codon-associated sequences optimized to perform different functions: termination of translation per se or alternative elongation events.

摘要

翻译终止时蛋白质合成的调控是一个相对未被充分探索但正在迅速发展的领域。阐明翻译终止机制的最新进展有助于理解与翻译终止相关的非规范事件。这些“重新编码”事件包括终止密码子的通读、不寻常氨基酸(如硒代半胱氨酸)的插入以及从一个开放阅读框产生多种多肽。本综述总结了与终止相关的重新编码事件的数据,并提出存在两种与终止密码子相关的序列,它们经过优化以执行不同的功能:翻译本身的终止或替代延伸事件。

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1
[Non-canonical decoding events at stop codons in eukaryotes].[真核生物中终止密码子处的非规范解码事件]
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Structural Basis for Translation Termination on a Pseudouridylated Stop Codon.假尿嘧啶化终止密码子上翻译终止的结构基础。
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How protein reads the stop codon and terminates translation.蛋白质如何识别终止密码子并终止翻译。
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[Non-standard genetic codes and translation termination].[非标准遗传密码与翻译终止]
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Terminating human mitochondrial protein synthesis: a shift in our thinking.终止人类线粒体蛋白质合成:思维的转变。
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Kinetics of stop codon recognition by release factor 1.释放因子1对终止密码子的识别动力学
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引用本文的文献

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Effective Population Size Predicts Local Rates but Not Local Mitigation of Read-through Errors.有效种群大小预测局部速率,但不能预测局部读通错误的缓解。
Mol Biol Evol. 2021 Jan 4;38(1):244-262. doi: 10.1093/molbev/msaa210.
2
In eubacteria, unlike eukaryotes, there is no evidence for selection favouring fail-safe 3' additional stop codons.在真细菌中,与真核生物不同,没有证据表明存在有利于无差错的 3' 附加终止密码子的选择。
PLoS Genet. 2019 Sep 17;15(9):e1008386. doi: 10.1371/journal.pgen.1008386. eCollection 2019 Sep.
3
Evolutionary Dynamics of Abundant Stop Codon Readthrough.
丰富的终止密码子通读的进化动力学
Mol Biol Evol. 2016 Dec;33(12):3108-3132. doi: 10.1093/molbev/msw189. Epub 2016 Sep 7.
4
Evidence of abundant stop codon readthrough in Drosophila and other metazoa.果蝇和其他后生动物中丰富的终止密码子通读的证据。
Genome Res. 2011 Dec;21(12):2096-113. doi: 10.1101/gr.119974.110. Epub 2011 Oct 12.
5
Protein multifunctionality: principles and mechanisms.蛋白质多功能性:原理与机制
Transl Oncogenomics. 2008 May 15;3:99-136.
6
Tandem stop codons in ciliates that reassign stop codons.重新分配终止密码子的纤毛虫中的串联终止密码子。
J Mol Evol. 2009 Apr;68(4):424-31. doi: 10.1007/s00239-009-9220-y. Epub 2009 Mar 18.